RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ZIC2O95409 532 aaPredicted RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 CLUP10909 449 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 OSMP13725 252 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 AKT2P31751 481 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 LTBRP36941 435 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 GABARAPL2P60520 117 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 NRROSQ86YC3 692 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 TRMT61AQ96FX7 289 aaKnown RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 GAL3ST4Q96RP7 486 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 LMF1Q96S06 567 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 TUBA1CQ9BQE3 449 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 ENKD1Q9H0I2 346 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 CCDC86Q9H6F5 360 aaKnown RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 COMMD3Q9UBI1 195 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 OR10H1Q9Y4A9 318 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 MPDZO75970 2070 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 TRIM64CA6NLI5 447 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 CDRT1O95170 752 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 RPLP0P05388 317 aaKnown RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 CELP19835 753 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 OR1D4P47884 311 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 EIF2B2P49770 351 aaKnown RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 LRIT3Q3SXY7 679 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 CRTC2Q53ET0 693 aaPredicted RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 C1orf189Q5VU69 101 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 RNF165Q6ZSG1 346 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 GOT1L1Q8NHS2 421 aaPredicted RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 DTNBP1Q96EV8 351 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 MMABQ96EY8 250 aaPredicted RBP9.96□□□□□ -0.81
CUL4A-201ENST00000326335 FOXN4Q96NZ1 517 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 OR2A14Q96R47 310 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 MAP3K3Q99759 626 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 TIMM29Q9BSF4 260 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 SLC38A1Q9H2H9 487 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 KIR3DX1Q9H7L2 352 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 CCNB1IP1Q9NPC3 277 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 FBXL4Q9UKA2 621 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 MAPRE3Q9UPY8 281 aa9.96□□□□□ -0.81
CUL4A-201ENST00000326335 CD8B2A6NJW9 211 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 SOCS6O14544 535 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 EMC8O43402 210 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 KDM1AO60341 852 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 SEMA3DO95025 777 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 CSF2P04141 144 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 FCER2P06734 321 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 CD8BP10966 210 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 TGFBR2P37173 567 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 GIPRP48546 466 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 CSNK1EP49674 416 aaKnown RBP9.96□□□□□ -0.82
CUL4A-201ENST00000326335 GFERP55789 205 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 IL18R1Q13478 541 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 ZNF404Q494X3 552 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 PLBD1Q6P4A8 553 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 OR52E4Q8NGH9 312 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 OR8D4Q8NGM9 314 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 PMEPA1Q969W9 287 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 MTERF3Q96E29 417 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 SAP130Q9H0E3 1048 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 FSCN3Q9NQT6 498 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 KLHL1Q9NR64 748 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 H2AFY2Q9P0M6 372 aaPredicted RBP9.96□□□□□ -0.82
CUL4A-201ENST00000326335 PCDH15Q96QU1 1955 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 FANCMQ8IYD8 2048 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 PI4KAP42356 2102 aa9.96□□□□□ -0.82
CUL4A-201ENST00000326335 EFCAB10A6NFE3 127 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 KHNYNO15037 678 aaKnown RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 SLC22A1O15245 554 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 GABARAPO95166 117 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 PEPDP12955 493 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 IFI30P13284 250 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 MYL12AP19105 171 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 ETV5P41161 510 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 ETV1P50549 477 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 RAB25P57735 213 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 TUBA3CQ13748 450 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 SPHARQ15513 63 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 ODF4Q2M2E3 257 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 FAM214AQ32MH5 1076 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 ZC3H12BQ5HYM0 836 aaKnown RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 UBE2Q1Q7Z7E8 422 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 COX4I2Q96KJ9 171 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 ASPNQ9BXN1 380 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 C20orf141Q9NUB4 165 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 DHCR7Q9UBM7 475 aaKnown RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 AP1M2Q9Y6Q5 423 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 GPX5O75715 221 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 HSD17B2P37059 387 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 SUZ12Q15022 739 aaKnown RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 EFHD2Q96C19 240 aaPredicted RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 RBM18Q96H35 190 aaKnown RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 ZFYVE21Q9BQ24 234 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 BEX2Q9BXY8 128 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 GPN2Q9H9Y4 310 aaPredicted RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 PNO1Q9NRX1 252 aaKnown RBP9.95□□□□□ -0.82
CUL4A-201ENST00000326335 TMEM9Q9P0T7 183 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 LOC110117498-PIK3R3F6TDL0 507 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 CDC42EP2O14613 210 aa9.95□□□□□ -0.82
CUL4A-201ENST00000326335 GUCY1B2O75343 617 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms