RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SPATA5L1Q9BVQ7 753 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 ZCCHC2Q9C0B9 1178 aaKnown RBP12.61□□□□□ -0.39
SKA3-202ENST00000314759 HDHD2Q9H0R4 259 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 OR52A5Q9H2C5 316 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 SLCO1C1Q9NYB5 712 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 NCKAP1Q9Y2A7 1128 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 COL4A6Q14031 1691 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 PRKRAO75569 313 aaKnown RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 PAPLNO95428 1278 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 RAF1P04049 648 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 GNSP15586 552 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 CTRB1P17538 263 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 CXCL3P19876 107 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 PSMB5P28074 263 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 SSTR2P30874 369 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 TRIM23P36406 574 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 TAS2R41P59536 307 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 ACSM1Q08AH1 577 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 MLC1Q15049 377 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 CTRB2Q6GPI1 263 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 RAET1GQ6H3X3 334 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 RASSF6Q6ZTQ3 369 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 KLHL36Q8N4N3 616 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 ZNF655Q8N720 491 aaPredicted RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 OR2L2Q8NH16 312 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 KLK6Q92876 244 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 DPCDQ9BVM2 203 aaPredicted RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 SPHK2Q9NRA0 654 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 ZNF224Q9NZL3 707 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 GPR55Q9Y2T6 319 aaPredicted RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 TCF20Q9UGU0 1960 aaKnown RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 C17orf113A0A1B0GUU1 675 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 GLOD5A6NK44 160 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 SURF4O15260 269 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 SLC19A2O60779 497 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 KELP23276 732 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 CFL1P23528 166 aaKnown RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 GPR1P46091 355 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 OMPP47874 163 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 RAB8AP61006 207 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 CCNJQ5T5M9 372 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 C11orf96Q7Z7L8 435 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 KLBQ86Z14 1044 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 GALNT11Q8NCW6 608 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 RFKQ969G6 155 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 PMEPA1Q969W9 287 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 ZG16BQ96DA0 208 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 LINC00615Q96LM1 132 aaPredicted RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 SECISBP2Q96T21 854 aaKnown RBP12.6□□□□□ -0.39
SKA3-202ENST00000314759 MED28Q9H204 178 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 SYNDIG1Q9H7V2 258 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 SEMA4GQ9NTN9 838 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 HCFC1R1Q9NWW0 138 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 ASB6Q9NWX5 421 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 ADAM30Q9UKF2 790 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 KCNE3Q9Y6H6 103 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 COL4A3Q01955 1670 aa12.6□□□□□ -0.39
SKA3-202ENST00000314759 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 IGHA1P01876 353 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 FGBP02675 491 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 CXCL10P02778 98 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 ALPPL2P10696 532 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 NCBP2P52298 156 aaKnown RBP eCLIP12.59□□□□□ -0.39
SKA3-202ENST00000314759 LASP1Q14847 261 aaKnown RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 PLA1AQ53H76 456 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 IDNKQ5T6J7 187 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 NDUFAF5Q5TEU4 345 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 LSRQ86X29 649 aaPredicted RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 SUN3Q8TAQ9 357 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 RGMAQ96B86 450 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 DPH7Q9BTV6 452 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 BTBD1Q9H0C5 482 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 SCML1Q9UN30 329 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 ING4Q9UNL4 249 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 EXOGQ9Y2C4 368 aaKnown RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 ASB4Q9Y574 426 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 CPSF4LA6NMK7 179 aaKnown RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 NDUFS4O43181 175 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 CHST10O43529 356 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 HRO43593 1189 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 TSPAN9O75954 239 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 SLC2A10O95528 541 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 HMGN2P05204 90 aaKnown RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 HK1P19367 917 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 KHKP50053 298 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 PIP5KL1Q5T9C9 394 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 ZNF322Q6U7Q0 402 aaPredicted RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 TMEM107Q6UX40 140 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 KCTD20Q7Z5Y7 419 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 UBL7Q96S82 380 aaPredicted RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 PIGUQ9H490 435 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 DDX31Q9H8H2 851 aaKnown RBP12.59□□□□□ -0.39
SKA3-202ENST00000314759 ISG20L2Q9H9L3 353 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms