RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TRAPPC6AO75865 159 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 IL33O95760 270 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ACP2P11117 423 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 GABRA1P14867 456 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 BGNP21810 368 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 EVI2BP34910 448 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 PTGER4P35408 488 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ASMTP46597 345 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 B3GALT5-AS1P59052 145 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ABCE1P61221 599 aaKnown RBP13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 RIPPLY2Q5TAB7 128 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 IL23RQ5VWK5 629 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ZAR1Q86SH2 424 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ADGRE4PQ86SQ3 457 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 PLCZ1Q86YW0 608 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 FAM110BQ8TC76 370 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ASB5Q8WWX0 329 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 PIK3R3Q92569 461 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 COQ8BQ96D53 544 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 TMCO6Q96DC7 493 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 FAM120BQ96EK7 910 aaKnown RBP13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ZBED6CLQ96FA7 236 aaPredicted RBP13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 SPOCK3Q9BQ16 436 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 EXO5Q9H790 373 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 COQ3Q9NZJ6 369 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 FAM90A27PA6NNH2 459 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 CBR3O75828 277 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 ZWINTO95229 277 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 G6PDP11413 515 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 PRPS2P11908 318 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 GRK2P25098 689 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 MSX1P28360 303 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 CEACAM8P31997 349 aaPredicted RBP13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 ATP6AP1LQ52LC2 224 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 MFSD12Q6NUT3 480 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 CAMKMTQ7Z624 323 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 RELL2Q8NC24 303 aaPredicted RBP13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 SLC16A11Q8NCK7 471 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 TLCD1Q96CP7 247 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 C16orf58Q96GQ5 468 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 SH3BP4Q9P0V3 963 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 RAP2CQ9Y3L5 183 aa13.26□□□□□ -0.29
PPP1CA-201ENST00000312989 IGLV3-32A0A0A0MS00 114 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 AHRRA9YTQ3 701 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 EPPINO95925 133 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 SNRPB2P08579 225 aaKnown RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 HOXD4P09016 255 aaPredicted RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 CPN1P15169 458 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 IL12BP29460 328 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 SRD5A2P31213 254 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 LHX2P50458 406 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 MRPS22P82650 360 aaKnown RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 EMX2Q04743 252 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 BST1Q10588 318 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 PDCD2Q16342 344 aaPredicted RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 DUSP5Q16690 384 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 FNDC5Q8NAU1 212 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 NUP43Q8NFH3 380 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 TNIP2Q8NFZ5 429 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 OR2M3Q8NG83 312 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 ABTB1Q969K4 478 aaPredicted RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 MS4A4EQ96PG1 132 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 KLHDC3Q9BQ90 382 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 CXorf36Q9H7Y0 433 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 AKTIPQ9H8T0 292 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 Q9N2J8 555 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 FBXO34Q9NWN3 711 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 FAM120CQ9NX05 1096 aaKnown RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 ABCG2Q9UNQ0 655 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 MRPS18CQ9Y3D5 142 aaKnown RBP13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 OR10H1Q9Y4A9 318 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 CACNA1CQ13936 2221 aa13.25□□□□□ -0.29
PPP1CA-201ENST00000312989 MBD3L4A6NDZ8 208 aaPredicted RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 MBD3L3A6NE82 208 aaPredicted RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 MBD3L5A6NJ08 208 aaPredicted RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 SCN2BO60939 215 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 SNNO75324 88 aaPredicted RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 HSPA4LO95757 839 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 COX6B1P14854 86 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 MAPK1P28482 360 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 GABRA3P34903 492 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 SLC1A6P48664 564 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 ZNF136P52737 540 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 DIO3P55073 304 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 MANFP55145 182 aaKnown RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 DLX5P56178 289 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 CLDN15P56746 228 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 CLDN18P56856 261 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 KRTAP10-9P60411 292 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 DECR1Q16698 335 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 SMU1Q2TAY7 513 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 NSUN5P2Q63ZY6 315 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 R3HCC1LQ7Z5L2 792 aaKnown RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 NINQ8N4C6 2090 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 CDRT4Q8N9R6 151 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms