RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NME4O00746 187 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TNFSF14O43557 240 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 DNAJB6O75190 326 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 H1F0P07305 194 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 S100A2P29034 98 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ATP12AP54707 1039 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 IL5RAQ01344 420 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CHRNEQ04844 493 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 POU4F2Q12837 409 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 FAM53BQ14153 422 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TRAM2Q15035 370 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 GAB4Q2WGN9 574 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 Q5PR19 223 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ATAD3CQ5T2N8 411 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SLC6A19Q695T7 634 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 C6orf120Q7Z4R8 191 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ZZZ3Q8IYH5 903 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 C2orf73Q8N5S3 287 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 NUP43Q8NFH3 380 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 FCRL4Q96PJ5 515 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ZPBPQ9BS86 351 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ADI1Q9BV57 179 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TINAGL1Q9GZM7 467 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TTYH1Q9H313 450 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CMTM6Q9NX76 183 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ERGIC3Q9Y282 383 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 HRH3Q9Y5N1 445 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CFAP20Q9Y6A4 193 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CLCA3PQ9Y6N3 262 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 IGHV1OR15-9A0A0B4J2B8 117 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 A0A1W2PQF6 199 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 ARGFXA6NJG6 315 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 GTPBP1O00178 669 aaKnown RBP5.65□□□□□ -1.5
SEC22A-201ENST00000309934 NDUFS8O00217 210 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 TOR1AO14656 332 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 OR2B3O76000 313 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 GPR75O95800 540 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 APOC3P02656 99 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 RD3LP0DJH9 198 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 ARAFP10398 606 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 RAB3BP20337 219 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 RAB4AP20338 218 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 CD40LGP29965 261 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 PRDX3P30048 256 aaKnown RBP5.65□□□□□ -1.5
SEC22A-201ENST00000309934 ACSL1P33121 698 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 GALNSP34059 522 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 FASLGP48023 281 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 CLDN2P57739 230 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 GABREP78334 506 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 HSD11B2P80365 405 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 GLO1Q04760 184 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 GAS6Q14393 721 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 NRF1Q16656 503 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 C18orf21Q32NC0 220 aaPredicted RBP5.65□□□□□ -1.5
SEC22A-201ENST00000309934 COLEC12Q5KU26 742 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 ARHGAP40Q5TG30 622 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 LCN1P1Q5VSP4 162 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 MEDAGQ5VYS4 303 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 FOXB2Q5VYV0 432 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 FBXO42Q6P3S6 717 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF767PQ75MW2 155 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 PAQR7Q86WK9 346 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 HAVCR2Q8TDQ0 301 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 CANT1Q8WVQ1 401 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 TRUB1Q8WWH5 349 aaKnown RBP5.65□□□□□ -1.5
SEC22A-201ENST00000309934 NCSTNQ92542 709 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 C12orf43Q96C57 262 aaKnown RBP5.65□□□□□ -1.5
SEC22A-201ENST00000309934 OR1F2PQ96R84 312 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 HBEGFQ99075 208 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 STACQ99469 402 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 NEURL2Q9BR09 285 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF559Q9BR84 538 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 MKKSQ9NPJ1 570 aaPredicted RBP5.65□□□□□ -1.5
SEC22A-201ENST00000309934 ACSS2Q9NR19 701 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 IKZF3Q9UKT9 509 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 PNMA8BQ9ULN7 279 aaPredicted RBP5.65□□□□□ -1.5
SEC22A-201ENST00000309934 PCDHB14Q9Y5E9 798 aa5.65□□□□□ -1.5
SEC22A-201ENST00000309934 A0A087WV62 115 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 EFCAB10A6NFE3 127 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 KHNYNO15037 678 aaKnown RBP5.65□□□□□ -1.51
SEC22A-201ENST00000309934 TBX1O43435 398 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 NUDT21O43809 227 aaKnown RBP5.65□□□□□ -1.51
SEC22A-201ENST00000309934 LILRB5O75023 590 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 FAM20BO75063 409 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 STX11O75558 287 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 CDC123O75794 336 aaPredicted RBP5.65□□□□□ -1.51
SEC22A-201ENST00000309934 DHFRP00374 187 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 MYL12AP19105 171 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 IL12BP29460 328 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 RORAP35398 523 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 SLC15A1P46059 708 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 CAPZBP47756 277 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 SLC6A8P48029 635 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 VSX2P58304 361 aaPredicted RBP5.65□□□□□ -1.51
SEC22A-201ENST00000309934 GABARAPL2P60520 117 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 RAB4BP61018 213 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 MERTKQ12866 999 aa5.65□□□□□ -1.51
SEC22A-201ENST00000309934 PDE7AQ13946 482 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms