RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MPP2Q14168 576 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 GALNTL6Q49A17 601 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 NSUN5P2Q63ZY6 315 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 EXOC3L1Q86VI1 746 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 AGR3Q8TD06 166 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 NUDT8Q8WV74 236 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 ABTB1Q969K4 478 aaPredicted RBP18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 PKNOX2Q96KN3 472 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 ZNF395Q9H8N7 513 aaPredicted RBP18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 SIRT3Q9NTG7 399 aaPredicted RBP18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 MPDZO75970 2070 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 HRNRQ86YZ3 2850 aaPredicted RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 F8P00451 2351 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 GXYLT2A0PJZ3 443 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 MBD3L4A6NDZ8 208 aaPredicted RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 MBD3L3A6NE82 208 aaPredicted RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 MBD3L5A6NJ08 208 aaPredicted RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 CD8B2A6NJW9 211 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 ITM2AO43736 263 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 IL33O95760 270 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 CHEK2O96017 543 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 ACTL6AO96019 429 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 CPN1P15169 458 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 GRK2P25098 689 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 IL12BP29460 328 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 SRD5A2P31213 254 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 SERPINB4P48594 390 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 ZNF136P52737 540 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 HSPB3Q12988 150 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 KRT71Q3SY84 523 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 C6orf136Q5SQH8 315 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 OR5M10Q6IEU7 315 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 APOOLQ6UXV4 268 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 LACC1Q8IV20 430 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 DDIASQ8IXT1 998 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 MBD3L2Q8NHZ7 208 aaPredicted RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 C20orf27Q9GZN8 174 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 EML4Q9HC35 981 aaKnown RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 ACSS1Q9NUB1 689 aaPredicted RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 ATP6V1HQ9UI12 483 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 CBLCQ9ULV8 474 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 MRPS18CQ9Y3D5 142 aaKnown RBP18■□□□□ 0.47
PDZRN3-202ENST00000308537 ABCA4P78363 2273 aa18■□□□□ 0.47
PDZRN3-202ENST00000308537 LYPLA1O75608 230 aaPredicted RBP17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 NKX2-2O95096 273 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 SSTR2P30874 369 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 LHX2P50458 406 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 PTGR1Q14914 329 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 SLC25A35Q3KQZ1 300 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 PM20D2Q8IYS1 436 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 PPCDCQ96CD2 204 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 MTERF3Q96E29 417 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 SH3GL2Q99962 352 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 SSU72Q9NP77 194 aaKnown RBP17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 CAMK2AQ9UQM7 478 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 OR10H1Q9Y4A9 318 aa17.99■□□□□ 0.47
PDZRN3-202ENST00000308537 CELSR1Q9NYQ6 3014 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 SCAMP2O15127 329 aaKnown RBP17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 ACP2P11117 423 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 EFNA1P20827 205 aaPredicted RBP17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 ASMTP46597 345 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 CLDN18P56856 261 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 TOMM20Q15388 145 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 TRIM42Q8IWZ5 723 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 HOMEZQ8IX15 550 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 RIMKLAQ8IXN7 391 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 OR2M3Q8NG83 312 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 ZPLD1Q8TCW7 415 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 PIK3R3Q92569 461 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 ZBED6CLQ96FA7 236 aaPredicted RBP17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 PPP3R2Q96LZ3 170 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 TUBA1CQ9BQE3 449 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 TAS2R10Q9NYW0 307 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 SH3BP4Q9P0V3 963 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 ABCG2Q9UNQ0 655 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 L3MBTL1Q9Y468 752 aa17.98■□□□□ 0.47
PDZRN3-202ENST00000308537 HSPB2A8KAH6 182 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 FAM47E-STBD1D6RA91 191 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 PEX11AO75192 247 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 SKAP2O75563 359 aaPredicted RBP17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 LAMP1P11279 417 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 PRPS2P11908 318 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 KRT20P35900 424 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 STARP49675 285 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 CLDN15P56746 228 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 MRPS22P82650 360 aaKnown RBP17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 TLE4Q04727 773 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 MLC1Q15049 377 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 HSPB2Q16082 182 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 FBXL19-AS1Q494R0 122 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 PLXDC2Q6UX71 529 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 ZAR1Q86SH2 424 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 C9orf106Q8NAJ2 232 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 SLC16A11Q8NCK7 471 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 OR7A2PQ8NGA2 310 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 PSMA8Q8TAA3 256 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 FAM110BQ8TC76 370 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 FAM120BQ96EK7 910 aaKnown RBP17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 ZIM3Q96PE6 472 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 UCN2Q96RP3 112 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms