RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CCNYL3P0C7X3 344 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 GSTM5P46439 218 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 VSX2P58304 361 aaPredicted RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 CDK5Q00535 292 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 CSTF1Q05048 431 aaKnown RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 INSL4Q14641 139 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 PUS10Q3MIT2 529 aaKnown RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 STEAP3Q658P3 488 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 GDF7Q7Z4P5 450 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 CADM3Q8N126 398 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 PARP16Q8N5Y8 322 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 OR4K14Q8NGD5 310 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 GATAD2BQ8WXI9 593 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 TM9SF4Q92544 642 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 MCHR1Q99705 422 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 ARHGDIGQ99819 225 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 POLR2J2Q9GZM3 115 aaKnown RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 CPNE7Q9UBL6 633 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 SLC7A7Q9UM01 511 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 PCDH15Q96QU1 1955 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 ASXL3Q9C0F0 2248 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 GXYLT2A0PJZ3 443 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 HRKO00198 91 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 MED26O95402 600 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 LALBAP00709 142 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 CPMP14384 443 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 DDX5P17844 614 aaKnown RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 CSTF2P33240 577 aaKnown RBP eCLIP10.99□□□□□ -0.65
RHO-201ENST00000296271 UGT2B10P36537 528 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 OMPP47874 163 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 EFNB1P98172 346 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 PLAURQ03405 335 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 ERV3-1Q14264 604 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 FAM214AQ32MH5 1076 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 TMEM201Q5SNT2 666 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 BHLHB9Q6PI77 547 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 C19orf48Q6RUI8 117 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 LHFPL3Q86UP9 236 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 SYT14Q8NB59 555 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 SRFBP1Q8NEF9 429 aaKnown RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 OR4F15Q8NGB8 312 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 S100ZQ8WXG8 99 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 OTULINQ96BN8 352 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 CRELD1Q96HD1 420 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 RIPOR3Q96MK2 946 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 TRNT1Q96Q11 434 aaKnown RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 DCLRE1CQ96SD1 692 aaKnown RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 C14orf119Q9NWQ9 140 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 ZSCAN32Q9NX65 697 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 PCOLCE2Q9UKZ9 415 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 WDR45Q9Y484 360 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 ABCA7Q8IZY2 2146 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 MPZL2O60487 215 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 KCNJ13O60928 360 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 CBFA2T3O75081 653 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SLITRK5O94991 958 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SEMA4FO95754 770 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 CDH3P22223 829 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 HTR2AP28223 471 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 CRYBB2P43320 205 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 TEKQ02763 1124 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 ZMAT1Q5H9K5 638 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 PLEKHM3Q6ZWE6 761 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 LYSMD2Q8IV50 215 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SLC44A3Q8N4M1 653 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 NANOGP1Q8N7R0 232 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 NT5CQ8TCD5 201 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SMAP2Q8WU79 429 aaPredicted RBP10.98□□□□□ -0.65
RHO-201ENST00000296271 SDF2Q99470 211 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 MED20Q9H944 212 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SNTG1Q9NSN8 517 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 C20orf141Q9NUB4 165 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 ERVK13-1Q9NX77 482 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SLC13A4Q9UKG4 626 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 ZNF443Q9Y2A4 671 aaPredicted RBP10.98□□□□□ -0.65
RHO-201ENST00000296271 SLC22A7Q9Y694 548 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 CSNK1G3Q9Y6M4 447 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 LRP4O75096 1905 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 DVL2O14641 736 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 B3GALT2O43825 422 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 APBB3O95704 486 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SCG5P05408 212 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 ST6GAL1P15907 406 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 ALOX12P18054 663 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 NT5EP21589 574 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 PPP5CP53041 499 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 CAV3P56539 151 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SMIM11AP58511 58 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 EIF2B5Q13144 721 aaKnown RBP10.98□□□□□ -0.65
RHO-201ENST00000296271 FBXO43Q4G163 708 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 ATAD3BQ5T9A4 648 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 FCRLBQ6BAA4 426 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 HSDL2Q6YN16 418 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 USP30Q70CQ3 517 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 FAM26EQ8N5C1 309 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 AMER2Q8N7J2 671 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 PFN4Q8NHR9 129 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 TM9SF2Q99805 663 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 SPATA5L1Q9BVQ7 753 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms