RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 TMEM255BQ8WV15 326 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 NEDD4LQ96PU5 975 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 SLC38A2Q96QD8 506 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 OR2M4Q96R27 311 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 TMEM165Q9HC07 324 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 ABCB9Q9NP78 766 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 CD93Q9NPY3 652 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 LIPT1Q9Y234 373 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 COLEC10Q9Y6Z7 277 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 TICRRQ7Z2Z1 1910 aa18.66■□□□□ 0.58
SCUBE1-201ENST00000290460 LINC01565O15544 149 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 LIMS3P0CW19 117 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 LIMS4P0CW20 117 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 IFNGR2P38484 337 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 RNF144AP50876 292 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 SIM1P81133 766 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 BNC1Q01954 994 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 KRR1Q13601 381 aaKnown RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 MINDY4Q4G0A6 757 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 DEFB134Q4QY38 66 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 C9orf50Q5SZB4 431 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 FRRS1Q6ZNA5 592 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 RASSF6Q6ZTQ3 369 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 MRGPREQ86SM8 312 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 OR4F15Q8NGB8 312 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 PIGXQ8TBF5 258 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 OR1E3Q8WZA6 343 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 ZNF624Q9P2J8 865 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 CMAHPQ9Y471 501 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 IQCMA0A1B0GVH7 501 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 P2RX6O15547 441 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 LALBAP00709 142 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 EN2P19622 333 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 TSFMP43897 325 aaKnown RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 ID2Q02363 134 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 FAM214AQ32MH5 1076 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 CCNJQ5T5M9 372 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 MFSD12Q6NUT3 480 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 ENPP7Q6UWV6 458 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 UTS2BQ765I0 119 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 TSACCQ96A04 125 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 GAL3ST3Q96A11 431 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 MCHR1Q99705 422 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 FGF20Q9NP95 211 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 MRPS18AQ9NVS2 196 aaKnown RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 LYARQ9NX58 379 aaKnown RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 OR6C2Q9NZP2 312 aa18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 PLEKHB1Q9UF11 243 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-201ENST00000290460 TMEM129A0AVI4 362 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 AP3D1O14617 1153 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 SLC2A10O95528 541 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 COL9A1P20849 921 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 PBX2P40425 430 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 ARFIP1P53367 373 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 CDH11P55287 796 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 CAV3P56539 151 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 TAB1Q15750 504 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 CRTC2Q53ET0 693 aaPredicted RBP18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 NXNL2Q5VZ03 156 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 TYW3Q6IPR3 259 aaKnown RBP18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 GDF7Q7Z4P5 450 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 ASPGQ86U10 573 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 LRRC25Q8N386 305 aaPredicted RBP18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 BBS1Q8NFJ9 593 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 SRRQ9GZT4 340 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 MIXL1Q9H2W2 232 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 CALML5Q9NZT1 146 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 KLF15Q9UIH9 416 aa18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 YBX2Q9Y2T7 364 aaKnown RBP18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 SF3B6Q9Y3B4 125 aaKnown RBP18.64■□□□□ 0.57
SCUBE1-201ENST00000290460 A0A1W2PQL4 384 aaPredicted RBP18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 KDM4EB2RXH2 506 aaPredicted RBP18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 KCNJ13O60928 360 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 IL1AP01583 271 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 CPN2P22792 545 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 PRKAR1BP31321 381 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 DBPQ10586 325 aaPredicted RBP18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 PUS10Q3MIT2 529 aaKnown RBP18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 PLK5Q496M5 336 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 FBXO42Q6P3S6 717 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 TMEFF1Q8IYR6 380 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 ACOT11Q8WXI4 607 aaPredicted RBP18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 SCARF2Q96GP6 870 aaPredicted RBP18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 SLC41A3Q96GZ6 507 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 C1QTNF7Q9BXJ2 289 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 SRMSQ9H3Y6 488 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 KLHL28Q9NXS3 571 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 ZNF443Q9Y2A4 671 aaPredicted RBP18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 HEBP2Q9Y5Z4 205 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 ZNF860A6NHJ4 632 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 AGRPO00253 132 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 CTSVO60911 334 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 FABP5Q01469 135 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 TNFRSF17Q02223 184 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 RGS1Q08116 209 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 HEPHL1Q6MZM0 1159 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 TMCO6Q96DC7 493 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 KCTD7Q96MP8 289 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 WDFY2Q96P53 400 aa18.63■□□□□ 0.57
SCUBE1-201ENST00000290460 MS4A4EQ96PG1 132 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms