RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ACVR1BP36896 505 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 MTNR1AP48039 350 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 SGSHP51688 502 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 PAGE3Q5JUK9 113 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 MS4A15Q8N5U1 240 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 SAMD12Q8N8I0 201 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 OR52R1Q8NGF1 315 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 SLC30A2Q9BRI3 323 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 TXLNGYQ9BZA5 131 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 NWD2Q9ULI1 1742 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 FANCGO15287 622 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 DHRS4L1P0CG22 281 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 CD27P26842 260 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 ELK4P28324 431 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 CNPY1Q3B7I2 92 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 RPS26P11Q5JNZ5 115 aaPredicted RBP17.48■□□□□ 0.39
PCDH1-201ENST00000287008 WACQ9BTA9 647 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 ENY2Q9NPA8 101 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 CEP290O15078 2479 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 MT-ND2P03891 347 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 TNFRSF1BP20333 461 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 MECP2P51608 486 aaKnown RBP17.48■□□□□ 0.39
PCDH1-201ENST00000287008 SELENOWP63302 87 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 HNRNPA0Q13151 305 aaKnown RBP17.48■□□□□ 0.39
PCDH1-201ENST00000287008 DNASE1L3Q13609 305 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 CTSL3PQ5NE16 218 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 PLBD1Q6P4A8 553 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 ADAMTSL4Q6UY14 1074 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 FOXRED2Q8IWF2 684 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 GALNT6Q8NCL4 622 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 PINK1Q9BXM7 581 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 FN3KQ9H479 309 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 DLGAP1O14490 977 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 EGFP01133 1207 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 HOXB9P17482 250 aaPredicted RBP17.48■□□□□ 0.39
PCDH1-201ENST00000287008 INHBCP55103 352 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 ZNF554Q86TJ5 538 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 BOLLQ8N9W6 283 aaKnown RBP17.48■□□□□ 0.39
PCDH1-201ENST00000287008 OR8S1Q8NH09 359 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 ABCD2Q9UBJ2 740 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 PCDHGA3Q9Y5H0 932 aa17.48■□□□□ 0.39
PCDH1-201ENST00000287008 ACPPP15309 386 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 MLC1Q15049 377 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 CDK10Q15131 360 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 TMEM201Q5SNT2 666 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 EIF5AL1Q6IS14 154 aaKnown RBP17.47■□□□□ 0.39
PCDH1-201ENST00000287008 RFLNAQ6ZTI6 216 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 PGBD5Q8N414 524 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 TUBA1CQ9BQE3 449 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 SLC5A7Q9GZV3 580 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 GPN2Q9H9Y4 310 aaPredicted RBP17.47■□□□□ 0.39
PCDH1-201ENST00000287008 RNF215Q9Y6U7 377 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 MICAL3Q7RTP6 2002 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 GABRR3A8MPY1 467 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 SIGLEC6O43699 453 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 FUT1P19526 365 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 GDF1P27539 372 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 FXYD6P3P58550 94 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 DCAF7P61962 342 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 PYHIN1Q6K0P9 492 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 SHFQ7M4L6 423 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 KLBQ86Z14 1044 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 OR10A4Q9H209 315 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 TRBV11-1A0A0K0K1C0 115 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 A0A1W2PPK0 400 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 GRXCR2A6NFK2 248 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 H3BUI4 141 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 EXOSC7Q15024 291 aaKnown RBP17.47■□□□□ 0.39
PCDH1-201ENST00000287008 C3orf33Q6P1S2 294 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 LRRN1Q6UXK5 716 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 ZNF595Q8IYB9 648 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 C19orf47Q8N9M1 422 aaKnown RBP17.47■□□□□ 0.39
PCDH1-201ENST00000287008 OR5D16Q8NGK9 328 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 ZNF701Q9NV72 531 aaPredicted RBP17.47■□□□□ 0.39
PCDH1-201ENST00000287008 VAPAQ9P0L0 249 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 ERVK-18Q9QC07 812 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 IL20RAQ9UHF4 553 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 OR2AT4A6NND4 320 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 LRRN3E7EW58 273 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 STSP08842 583 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 CPMP14384 443 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 CRABP1P29762 137 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 PCGF2P35227 344 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 EPHA4P54764 986 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 NKX3-2P78367 333 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 TAP2Q03519 686 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 LHX8Q68G74 356 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 NETO1Q8TDF5 533 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 LRRN3Q9H3W5 708 aa17.47■□□□□ 0.39
PCDH1-201ENST00000287008 IGLV3-10A0A075B6K4 115 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 FOXE1O00358 373 aaPredicted RBP17.46■□□□□ 0.39
PCDH1-201ENST00000287008 PPP6CO00743 305 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 FRS3O43559 492 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 OSMP13725 252 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 ADH7P40394 386 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 TAZQ16635 292 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 TAMM41Q96BW9 452 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 NUFIP1Q9UHK0 495 aaKnown RBP17.46■□□□□ 0.39
PCDH1-201ENST00000287008 CD46P15529 392 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms