RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 TRBV4-1A0A0J9YWV2 114 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 H0YIG0 161 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 OR10H3O60404 316 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 FCMRO60667 390 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 COQ9O75208 318 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 EPPINO95925 133 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 MT-ND2P03891 347 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 MAP2K4P45985 399 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 PDX1P52945 283 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 MGAT2Q10469 447 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 STX4Q12846 297 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 SLC13A2Q13183 592 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 LARS2Q15031 903 aaKnown RBP14.28□□□□□ -0.12
SF3B4-201ENST00000271628 TRIM16LQ309B1 348 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 EXOSC6Q5RKV6 272 aaKnown RBP14.28□□□□□ -0.12
SF3B4-201ENST00000271628 LAIR1Q6GTX8 287 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 FRRS1Q6ZNA5 592 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 WDR53Q7Z5U6 358 aaPredicted RBP14.28□□□□□ -0.12
SF3B4-201ENST00000271628 C11orf74Q86VG3 221 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 P3H2Q8IVL5 708 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 VWA5B2Q8N398 1253 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 FCGR1BQ92637 280 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 GTPBP3Q969Y2 492 aaKnown RBP14.28□□□□□ -0.12
SF3B4-201ENST00000271628 SDF2Q99470 211 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 ARHGDIGQ99819 225 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 WFDC6Q9BQY6 131 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 MROQ9BYG7 248 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 QRSL1Q9H0R6 528 aaKnown RBP14.28□□□□□ -0.12
SF3B4-201ENST00000271628 SCN2AQ99250 2005 aa14.28□□□□□ -0.12
SF3B4-201ENST00000271628 CLDN24A6NM45 220 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 STX11O75558 287 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 ACP2P11117 423 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 POU2F1P14859 743 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 PSMB9P28065 219 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 MASP1P48740 699 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 HSD11B2P80365 405 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 DUSP8Q13202 625 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 BIKQ13323 160 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 OXA1LQ15070 435 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 TYW3Q6IPR3 259 aaKnown RBP14.27□□□□□ -0.12
SF3B4-201ENST00000271628 CCDC81Q6ZN84 652 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 ENTHD1Q8IYW4 607 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 SIMC1Q8NDZ2 872 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 SLC7A13Q8TCU3 470 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 DYNC2LI1Q8TCX1 351 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 ZG16BQ96DA0 208 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 MMABQ96EY8 250 aaPredicted RBP14.27□□□□□ -0.12
SF3B4-201ENST00000271628 PEX11GQ96HA9 241 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 SIGLEC11Q96RL6 698 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 ENAMQ9NRM1 1142 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 MKLN1Q9UL63 735 aa14.27□□□□□ -0.12
SF3B4-201ENST00000271628 PCDHGA12O60330 932 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 MAN1A2O60476 641 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 NADKO95544 446 aaPredicted RBP14.27□□□□□ -0.13
SF3B4-201ENST00000271628 THBS1P07996 1170 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 FNTBP49356 437 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 ARL4DP49703 201 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 UGT2B15P54855 530 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 OR1D5P58170 312 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 TEKQ02763 1124 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 COX10Q12887 443 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 TSSK4Q6SA08 328 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 KLHL17Q6TDP4 642 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 COMTD1Q86VU5 262 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 VRK2Q86Y07 508 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 CCDC71Q8IV32 467 aaPredicted RBP14.27□□□□□ -0.13
SF3B4-201ENST00000271628 GALNT12Q8IXK2 581 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 SLC35F3Q8IY50 421 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 LGALS12Q96DT0 336 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 FUZQ9BT04 418 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 UCK2Q9BZX2 261 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 SAP130Q9H0E3 1048 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 RASSF1Q9NS23 344 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 SELENONQ9NZV5 590 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 HCN3Q9P1Z3 774 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 SUSD2Q9UGT4 822 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 KLHL3Q9UH77 587 aa14.27□□□□□ -0.13
SF3B4-201ENST00000271628 NME6O75414 186 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 WBP4O75554 376 aaKnown RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 MED26O95402 600 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 FADS2O95864 444 aaKnown RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 CT62P0C5K7 136 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 FUT4P22083 530 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 KRT20P35900 424 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 MAP3K8P41279 467 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 DHPSP49366 369 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 CRISP1P54107 249 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 HSD17B7P56937 341 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 CDC42P60953 191 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 VBP1P61758 197 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 IGLV3-21P80748 117 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 PTGES3Q15185 160 aaKnown RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 SMN1Q16637 294 aaKnown RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 EIPR1Q53HC9 387 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 DCST2Q5T1A1 773 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 UBE2UQ5VVX9 321 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ADCK1Q86TW2 530 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 COX18Q8N8Q8 333 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms