RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 A0A087WUU8 490 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 KIAA0513O60268 411 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 NKX2-2O95096 273 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 SOX14O95416 240 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 AK1P00568 194 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 POU1F1P28069 291 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 HOXA6P31267 233 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 EMP3P54852 163 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 RGS8P57771 180 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 BNC1Q01954 994 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 ALDH6A1Q02252 535 aaKnown RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 COX10Q12887 443 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 LARS2Q15031 903 aaKnown RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 SLX4IPQ5VYV7 408 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 TSSK4Q6SA08 328 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 GALNT12Q8IXK2 581 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 CARFQ8N187 725 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 GPR151Q8TDV0 419 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 GPA33Q99795 319 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 ANKRD19PQ9H560 264 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 MUTYHQ9UIF7 546 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 KCNE5Q9UJ90 142 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF232Q9UNY5 417 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 CPSF4LA6NMK7 179 aaKnown RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 CLCA1A8K7I4 914 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 H0YIG0 161 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 COQ9O75208 318 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 CDC123O75794 336 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 GLB1P16278 677 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 GABRA3P34903 492 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 HOXC5Q00444 222 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 MVKQ03426 396 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 ERV3-1Q14264 604 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 KCNAB1Q14722 419 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 NR1D2Q14995 579 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 TRAM2Q15035 370 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 GPR68Q15743 365 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 ENTPD8Q5MY95 495 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 C12orf73Q69YU5 71 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 SVOPQ8N4V2 548 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 GGHQ92820 318 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 MMABQ96EY8 250 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 AHCYL2Q96HN2 611 aaKnown RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 LMF2Q9BU23 707 aaKnown RBP15.47■□□□□ 0.07
CCDC40-201ENST00000269318 SLC24A3Q9HC58 644 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 ACOT13Q9NPJ3 140 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 PRTFDC1Q9NRG1 225 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 IRAK4Q9NWZ3 460 aa15.47■□□□□ 0.07
CCDC40-201ENST00000269318 CCDC163A0A0D9SF12 145 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 GXYLT2A0PJZ3 443 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 MPZL2O60487 215 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 THY1P04216 161 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 DBIP07108 87 aaKnown RBP15.46■□□□□ 0.07
CCDC40-201ENST00000269318 CCNYL3P0C7X3 344 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 EMDP50402 254 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF136P52737 540 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 BTG2P78543 158 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 PSG6Q00889 435 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 ST3GAL3Q11203 375 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 STX4Q12846 297 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 GRM7Q14831 915 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 EIPR1Q53HC9 387 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 SYT6Q5T7P8 510 aaPredicted RBP15.46■□□□□ 0.07
CCDC40-201ENST00000269318 CWF19L1Q69YN2 538 aaKnown RBP15.46■□□□□ 0.07
CCDC40-201ENST00000269318 RAB2BQ8WUD1 216 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 RORBQ92753 470 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 PMM1Q92871 262 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 RIT1Q92963 219 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 SLC38A4Q969I6 547 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 COPS4Q9BT78 406 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 FUNDC2Q9BWH2 189 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 ALOXE3Q9BYJ1 711 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 AMBNQ9NP70 447 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 SEMA5BQ9P283 1151 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 NTNG1Q9Y2I2 539 aa15.46■□□□□ 0.07
CCDC40-201ENST00000269318 TMX2-CTNND1H3BSU7 103 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 HRKO00198 91 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 CLDN4O14493 209 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 AP3D1O14617 1153 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 BRINP1O60477 761 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 FADS2O95864 444 aaKnown RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 NID1P14543 1247 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 CSF2RBP32927 897 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 GPR3P46089 330 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 NUDT6P53370 316 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 POU6F2P78424 691 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 ZNF155Q12901 538 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 METTL27Q8N6F8 245 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 OR51Q1Q8NH59 317 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 RBM18Q96H35 190 aaKnown RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 ELF4Q99607 663 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 MCHR1Q99705 422 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 CACYBPQ9HB71 228 aaKnown RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 C11orf16Q9NQ32 467 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 POLE3Q9NRF9 147 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 OR2W5A6NFC9 320 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 H3BN98 237 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 PEX12O00623 359 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 ZNF749O43361 778 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 DUX1O43812 170 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 840.2 ms