RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PAQR7Q86WK9 346 aa14.54□□□□□ -0.08
TIMP3-201ENST00000266085 DUSP23Q9BVJ7 150 aa14.54□□□□□ -0.08
TIMP3-201ENST00000266085 EPHX3Q9H6B9 360 aa14.54□□□□□ -0.08
TIMP3-201ENST00000266085 IL37Q9NZH6 218 aa14.54□□□□□ -0.08
TIMP3-201ENST00000266085 GPR52Q9Y2T5 361 aa14.54□□□□□ -0.08
TIMP3-201ENST00000266085 HTR3EA5X5Y0 456 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 ITGA3P26006 1051 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 CCSMST1Q4G0I0 132 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 ABCA11PQ4W5N1 156 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 TMEM236Q5W0B7 351 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 L3MBTL4Q8NA19 623 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 ZNF548Q8NEK5 533 aaPredicted RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 WDR77Q9BQA1 342 aaPredicted RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 FUNDC2Q9BWH2 189 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 RXFP3Q9NSD7 469 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 ACSS1Q9NUB1 689 aaPredicted RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 PCDHGA10Q9Y5H3 936 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 SH3PXD2BA1X283 911 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 ACVR1BP36896 505 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 C22orf42Q6IC83 251 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 WDR53Q7Z5U6 358 aaPredicted RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 GATAD2BQ8WXI9 593 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 EXTL2Q9UBQ6 330 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 TRIOBPQ9H2D6 2365 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 KIAA0513O60268 411 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 NDUFB2O95178 105 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 MAD2L1BPQ15013 274 aaPredicted RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 CMPK2Q5EBM0 449 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 HENMT1Q5T8I9 393 aaKnown RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 TMEM207Q6UWW9 146 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 ALDH16A1Q8IZ83 802 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 ADAMTS19Q8TE59 1207 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 CNN2Q99439 309 aaKnown RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 MOV10Q9HCE1 1003 aaKnown RBP14.53□□□□□ -0.08
TIMP3-201ENST00000266085 CNIH4Q9P003 139 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 SPTA1P02549 2419 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 K7ESM1 405 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 SLCO2B1O94956 709 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 TPMTP51580 245 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 PRR22Q8IZ63 422 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 MS4A15Q8N5U1 240 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 IQCF1Q8N6M8 205 aa14.53□□□□□ -0.08
TIMP3-201ENST00000266085 C5orf51A6NDU8 294 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 VSTM5A8MXK1 200 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 FBP2O00757 339 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 RLN2P04090 185 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 CTXN1P60606 82 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 GK3PQ14409 553 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 HSF5Q4G112 596 aaPredicted RBP14.52□□□□□ -0.08
TIMP3-201ENST00000266085 ZNF619Q8N2I2 560 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 UBTD2Q8WUN7 234 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 SCGB3A2Q96PL1 93 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 CITED4Q96RK1 184 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 FGF22Q9HCT0 170 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 PCDHB16Q9NRJ7 776 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 PFDN2Q9UHV9 154 aa14.52□□□□□ -0.08
TIMP3-201ENST00000266085 NPIPA5A0A0B4J1W7 369 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 NPIPA7E9PJI5 369 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 HMGB3O15347 200 aaKnown RBP14.52□□□□□ -0.09
TIMP3-201ENST00000266085 GPR75O95800 540 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 P04436 131 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 NPIPA8P0DM63 369 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 MFSD13AQ14CX5 517 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 CBLL1Q75N03 491 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 CCDC54Q8NEL0 328 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 SAMD8Q96LT4 415 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 ELOAQ14241 798 aaKnown RBP14.52□□□□□ -0.09
TIMP3-201ENST00000266085 EXOSC7Q15024 291 aaKnown RBP14.52□□□□□ -0.09
TIMP3-201ENST00000266085 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.52□□□□□ -0.09
TIMP3-201ENST00000266085 AFMIDQ63HM1 303 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 OR13H1Q8NG92 308 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 PHF7Q9BWX1 381 aaPredicted RBP14.52□□□□□ -0.09
TIMP3-201ENST00000266085 ADAM29Q9UKF5 820 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 MEMO1Q9Y316 297 aa14.52□□□□□ -0.09
TIMP3-201ENST00000266085 A0A1W2PPK0 400 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 VAMP1P23763 118 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 DPP6P42658 865 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 RAB2AP61019 212 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 CDK5R2Q13319 367 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 PRAMEF17Q5VTA0 474 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 DPH1Q9BZG8 443 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 MBNL1Q9NR56 388 aaKnown RBP14.51□□□□□ -0.09
TIMP3-201ENST00000266085 I6L893 689 aaPredicted RBP14.51□□□□□ -0.09
TIMP3-201ENST00000266085 UBFD1O14562 309 aaKnown RBP14.51□□□□□ -0.09
TIMP3-201ENST00000266085 ZNF432O94892 652 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 OR1D4P47884 311 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 ERV3-1Q14264 604 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 PGM2L1Q6PCE3 622 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 ZNF613Q6PF04 617 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 IQCF2Q8IXL9 164 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 ZFP41Q8N8Y5 198 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 NAXEQ8NCW5 288 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 OR8J2Q8NGG1 315 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 ZFAND2BQ8WV99 257 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 PPP1R14BQ96C90 147 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 ZNF597Q96LX8 424 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 ARHGAP9Q9BRR9 750 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 HDHD5Q9BXW7 423 aa14.51□□□□□ -0.09
TIMP3-201ENST00000266085 CCDC59Q9P031 241 aaKnown RBP14.51□□□□□ -0.09
TIMP3-201ENST00000266085 SLC7A7Q9UM01 511 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms