RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SAMD8Q96LT4 415 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 MED28Q9H204 178 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ATP13A2Q9NQ11 1180 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 IMP3Q9NV31 184 aaKnown RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 SF3B6Q9Y3B4 125 aaKnown RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 SLC5A10A0PJK1 596 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ACP5P13686 325 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 SNRPBP14678 240 aaKnown RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 CPEP16870 476 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 UQCRC2P22695 453 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ERP29P30040 261 aaKnown RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 HMGA2P52926 109 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 PLK5Q496M5 336 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 GXYLT1Q4G148 440 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 KLHL22Q53GT1 634 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 PARS2Q7L3T8 475 aaKnown RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 KANSL1Q7Z3B3 1105 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 C16orf62Q7Z3J2 963 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 GLRX5Q86SX6 157 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 FIBINQ8TAL6 211 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 EIF3KQ9UBQ5 218 aaKnown RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 SPATA2Q9UM82 520 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 MAPRE3Q9UPY8 281 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 GSTK1Q9Y2Q3 226 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 C4orf51C9J302 202 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 IL1AP01583 271 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 GRPRP30550 384 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 SSR2P43308 183 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 KCNJ5P48544 419 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 MAB21L1Q13394 359 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 HENMT1Q5T8I9 393 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 ZC3H14Q6PJT7 736 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 CDH24Q86UP0 819 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 FAM129CQ86XR2 697 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 PEX5LQ8IYB4 626 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 C17orf47Q8NEP4 570 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 MSLNLQ96KJ4 702 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 ZNF354BQ96LW1 612 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 LGR4Q9BXB1 951 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 GLIPR2Q9H4G4 154 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 FKRPQ9H9S5 495 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 NPAP1Q9NZP6 1156 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 MGAT4BQ9UQ53 548 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 NAT1P18440 290 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 ITGB7P26010 798 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 SOX9P48436 509 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 SNRPGP62308 76 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 DGCR2P98153 550 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 LYPD4Q6UWN0 246 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 GDPD1Q8N9F7 314 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 SLC35G5Q96KT7 338 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 TEFMQ96QE5 360 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 BBS4Q96RK4 519 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 GAL3ST1Q99999 423 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 TMEM43Q9BTV4 400 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 BRF2Q9HAW0 419 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 DIMT1Q9UNQ2 313 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 NCKAP1Q9Y2A7 1128 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 PLEKHM1Q9Y4G2 1056 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 FAAHO00519 579 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 CHST10O43529 356 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 MPZL2O60487 215 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 SOD1P00441 154 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 RPS5P46782 204 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 EVX1P49640 407 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 PNLIPRP1P54315 467 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 DEFB103AP81534 67 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 FUT5Q11128 374 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 COX10Q12887 443 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 SRSF5Q13243 272 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 SP140Q13342 867 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 AGERQ15109 404 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 LIPIQ6XZB0 460 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 QSOX2Q6ZRP7 698 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 C9orf62Q8N4C0 152 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 OR9A1PQ8NGU1 263 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 THAP7Q9BT49 309 aaPredicted RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 DPH7Q9BTV6 452 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 DPH1Q9BZG8 443 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 SYNPO2LQ9H987 977 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
SNX1-201ENST00000261889 ANAPC1Q9H1A4 1944 aa12.18□□□□□ -0.46
SNX1-201ENST00000261889 OR52A4PA6NMU1 304 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 TGM5O43548 720 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 ORC5O43913 435 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 ADRB1P08588 477 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 PRG2P13727 222 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 GAS1P54826 345 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 ELAVL2Q12926 359 aaKnown RBP12.17□□□□□ -0.46
SNX1-201ENST00000261889 TEAD2Q15562 447 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 NTRK2Q16620 822 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 NDUFAF5Q5TEU4 345 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 VASNQ6EMK4 673 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 MZT2BQ6NZ67 158 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 SLC27A4Q6P1M0 643 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 PLEKHM3Q6ZWE6 761 aa12.17□□□□□ -0.46
SNX1-201ENST00000261889 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms