RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SYT12Q8IV01 421 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 GRHL3Q8TE85 626 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 HTRA1Q92743 480 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 OR2M4Q96R27 311 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 NODALQ96S42 347 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CTRCQ99895 268 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 C1orf109Q9NX04 203 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 TAGLN3Q9UI15 199 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PRRC2AP48634 2157 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 MALRD1Q5VYJ5 2156 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 A0A0A6YYC8 382 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CDHR4A6H8M9 788 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ANKRD33BA6NCL7 494 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 LILRA5A6NI73 299 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 I3L1I5 382 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PLOD3O60568 738 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 DPM1O60762 260 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ATG13O75143 517 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 SEC22BO75396 215 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 RDH16O75452 317 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 NDUFS3O75489 264 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PRKD3O94806 890 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 APODP05090 189 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 C8GP07360 202 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 LOXP28300 417 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 THBS2P35442 1172 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 IFNGR2P38484 337 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ARFIP2P53365 341 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 E2F1Q01094 437 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CSTF3Q12996 717 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 DEFB134Q4QY38 66 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 AGKQ53H12 422 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CEP78Q5JTW2 689 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 TRAPPC5Q8IUR0 188 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 P3H2Q8IVL5 708 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 DCUN1D3Q8IWE4 304 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 METTL27Q8N6F8 245 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 NLGN4YQ8NFZ3 816 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PEX11GQ96HA9 241 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 NSL1Q96IY1 281 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 TRMOQ9BU70 441 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 GABARAPL1Q9H0R8 117 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KIF17Q9P2E2 1029 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 RALYQ9UKM9 306 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 EIF3LQ9Y262 564 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 TNCP24821 2201 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 A0A0B4J293 547 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 M0R3H8 397 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KMOO15229 486 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 MAGEB4O15481 346 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 AQP9O43315 295 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CLEC3AO75596 197 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 NKX2-2O95096 273 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PGM3O95394 542 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 MMP11P24347 488 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ELK4P28324 431 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KRT20P35900 424 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 LIPEQ05469 1076 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KLC1Q07866 573 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PDAP1Q13442 181 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 FLOT2Q14254 428 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 RP9Q8TA86 221 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ATL1Q8WXF7 558 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 MAP6Q96JE9 813 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ADAM19Q9H013 955 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 RHCGQ9UBD6 479 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 MRTO4Q9UKD2 239 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 FAM32AQ9Y421 112 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 RBP1P09455 135 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 HNMTP50135 292 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PSME3P61289 254 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 LRRC74AQ0VAA2 488 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 DYNC1I2Q13409 638 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KRTAP27-1Q3LI81 207 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KRT80Q6KB66 452 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 NIPAL1Q6NVV3 410 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 DNAJC14Q6Y2X3 702 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PTCHD4Q6ZW05 846 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CYP4Z2PQ8N1L4 340 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 TRIML2Q8N7C3 387 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF555Q8NEP9 628 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ASZ1Q8WWH4 475 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF354BQ96LW1 612 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 C1orf147Q96MC9 270 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 BTBD9Q96Q07 612 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 EGFL8Q99944 293 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KCNH6Q9H252 994 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ACTR3BQ9P1U1 418 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 KIAA2026Q5HYC2 2103 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 DPPA5A6NC42 116 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 GPR89AB7ZAQ6 455 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 DENRO43583 198 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 UGT2B11O75310 529 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 CDC123O75794 336 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 GPR89BP0CG08 455 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 FGF5P12034 268 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 RAPSNQ13702 412 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 RBBP7Q16576 425 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 PRAMEF13Q5VWM6 474 aa5.13□□□□□ -1.59
TOPBP1-201ENST00000260810 ADAMTSL2Q86TH1 951 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms