RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 N6AMT1Q9Y5N5 214 aa23.91■■□□□ 1.42
RAB40C-201ENST00000248139 CSF3P09919 207 aa23.91■■□□□ 1.42
RAB40C-201ENST00000248139 CDH11P55287 796 aa23.91■■□□□ 1.42
RAB40C-201ENST00000248139 RGS8P57771 180 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-201ENST00000248139 GLYR1Q49A26 553 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-201ENST00000248139 C3orf38Q5JPI3 329 aa23.91■■□□□ 1.42
RAB40C-201ENST00000248139 BHLHB9Q6PI77 547 aa23.91■■□□□ 1.42
RAB40C-201ENST00000248139 TTLQ8NG68 377 aa23.91■■□□□ 1.42
RAB40C-201ENST00000248139 GNPDA2Q8TDQ7 276 aa23.91■■□□□ 1.42
RAB40C-201ENST00000248139 RSPH9Q9H1X1 276 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-201ENST00000248139 IQCMA0A1B0GVH7 501 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 SHISA3A0PJX4 238 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 CDC42EP2O14613 210 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 KRT8P05787 483 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 ZNF888P0CJ79 500 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-201ENST00000248139 SIM1P81133 766 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-201ENST00000248139 BNC1Q01954 994 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 TRAM2Q15035 370 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 PLK5Q496M5 336 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 PYDC2Q56P42 97 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 PLEKHM3Q6ZWE6 761 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 NACC2Q96BF6 587 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 C11orf54Q9H0W9 315 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-201ENST00000248139 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 C2orf92A0A1B0GVN3 265 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 CACNB4O00305 520 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-201ENST00000248139 SOCS6O14544 535 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 CASC3O15234 703 aaKnown RBP23.9■■□□□ 1.42
RAB40C-201ENST00000248139 CELP19835 753 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 RAB40BQ12829 278 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 TSPAN31Q12999 210 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 GALNT12Q8IXK2 581 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 ADAMTS15Q8TE58 950 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 GIMAP5Q96F15 307 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 MCHR1Q99705 422 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 TBC1D29Q9UFV1 150 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 ZNF780BQ9Y6R6 833 aa23.9■■□□□ 1.42
RAB40C-201ENST00000248139 ZNF860A6NHJ4 632 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 H0Y8X5 98 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 IL1AP01583 271 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 GSTM3P21266 225 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 APEX1P27695 318 aaKnown RBP23.89■■□□□ 1.42
RAB40C-201ENST00000248139 DMPKQ09013 629 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 RNLSQ5VYX0 342 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 HSDL2Q6YN16 418 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 ATP6V1C2Q8NEY4 427 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 MED20Q9H944 212 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 CLCA2Q9UQC9 943 aa23.89■■□□□ 1.42
RAB40C-201ENST00000248139 NPIPA5A0A0B4J1W7 369 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 SLC35F4A4IF30 521 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 NPIPA7E9PJI5 369 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 NPIPA8P0DM63 369 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 SLC9A3P48764 834 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 UBE3AQ05086 875 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 SLC25A30Q5SVS4 291 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 VN1R4Q7Z5H5 301 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 UFD1Q92890 307 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 SLC38A2Q96QD8 506 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 SLC17A9Q9BYT1 436 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 ZNF221Q9UK13 617 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 LIPT1Q9Y234 373 aa23.89■■□□□ 1.41
RAB40C-201ENST00000248139 POM121BA6NF01 834 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 CASKO14936 926 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 SLC1A3P43003 542 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 STXBP1P61764 594 aaKnown RBP23.88■■□□□ 1.41
RAB40C-201ENST00000248139 BCL2A1Q16548 175 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 GDF7Q7Z4P5 450 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 IL17RCQ8NAC3 791 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 EFHD2Q96C19 240 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBX5Q99593 518 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 ARHGDIGQ99819 225 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3DA0A087WVF3 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3IA0A087WXS9 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3EA0A087X179 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3KA0A087X1G2 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3FA6NER0 549 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-201ENST00000248139 CD8B2A6NJW9 211 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3LB9A6J9 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 SLC30A4O14863 429 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3HP0C7X1 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 CD8BP10966 210 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 PRG2P13727 222 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 ATP6V1E1P36543 226 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 ST3GAL3Q11203 375 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 GPM6BQ13491 265 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 AGERQ15109 404 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 MINDY4Q4G0A6 757 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 PDZK1Q5T2W1 519 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3GQ6DHY5 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3CQ6IPX1 549 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 RAB43Q86YS6 212 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TRIM48Q8IWZ4 208 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 TBC1D3Q8IZP1 549 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-201ENST00000248139 PIGXQ8TBF5 258 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 SFXN5Q8TD22 340 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 WDFY2Q96P53 400 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 FGF20Q9NP95 211 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-201ENST00000248139 DPP7Q9UHL4 492 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 PCDHGB2Q9Y5G2 931 aa23.88■■□□□ 1.41
RAB40C-201ENST00000248139 GKN3PP0CG01 181 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms