RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 IFNA4P05014 189 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 ATP5A1P25705 553 aaKnown RBP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 CDC42P60953 191 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 VMACQ2NL98 169 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 ITPRIPL2Q3MIP1 535 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 TTLL9Q3SXZ7 439 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 TCTE1Q5JU00 501 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 SERPINA13PQ6UXR4 307 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 ELP4Q96EB1 424 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 IL4I1Q96RQ9 567 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 DERL2Q9GZP9 239 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 CD84Q9UIB8 345 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 FAM50BQ9Y247 325 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 NPTNQ9Y639 398 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 D6RAR5 112 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 DPM1O60762 260 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 ALDOBP05062 364 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 ZNF806P0C7X5 589 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 ACADLP28330 430 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 KCNJ5P48544 419 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 PIK3CGP48736 1102 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 CRYBA2P53672 197 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 CLDN8P56748 225 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 ST8SIA6P61647 398 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 TAF1AQ15573 450 aaPredicted RBP18.67■□□□□ 0.58
HOXC13-201ENST00000243056 C18orf21Q32NC0 220 aaPredicted RBP18.67■□□□□ 0.58
HOXC13-201ENST00000243056 C2orf27AQ580R0 203 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 PSAPL1Q6NUJ1 521 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 TMEM88Q6PEY1 159 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 RBMS3Q6XE24 437 aaKnown RBP18.67■□□□□ 0.58
HOXC13-201ENST00000243056 ZDHHC1Q8WTX9 485 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 UBE2ZQ9H832 354 aaPredicted RBP18.67■□□□□ 0.58
HOXC13-201ENST00000243056 KCNK12Q9HB15 430 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 NIT2Q9NQR4 276 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 PRDM6Q9NQX0 595 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 SLC9A8Q9Y2E8 581 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 DENND4AQ7Z401 1863 aa18.67■□□□□ 0.58
HOXC13-201ENST00000243056 A0A0G2JPF8 293 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 HNRNPCL3B7ZW38 293 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 KPNA3O00505 521 aaPredicted RBP18.66■□□□□ 0.58
HOXC13-201ENST00000243056 HTR3BO95264 441 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 RNF224P0DH78 156 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 SMIM6P0DI80 62 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 HNRNPCL4P0DMR1 293 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 ENGP17813 658 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 CNR2P34972 360 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 HMGCS1Q01581 520 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 FAM74A1Q5RGS3 127 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 FAM151BQ6UXP7 276 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 GDPD4Q6W3E5 623 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 PTOV1Q86YD1 416 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 LGI4Q8N135 537 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 CRB3Q9BUF7 120 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 PTDSS2Q9BVG9 487 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 DNAJC27Q9NZQ0 273 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 CLCA2Q9UQC9 943 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 LPOP22079 712 aaPredicted RBP18.66■□□□□ 0.58
HOXC13-201ENST00000243056 SRP9P49458 86 aaKnown RBP18.66■□□□□ 0.58
HOXC13-201ENST00000243056 FCRLBQ6BAA4 426 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 SLC25A25Q6KCM7 469 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 CRTC1Q6UUV9 634 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 SCARB1Q8WTV0 552 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 ZFPM2Q8WW38 1151 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 KCNJ9Q92806 393 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 TCEAL3Q969E4 200 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 POPDC3Q9HBV1 291 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 NLGN3Q9NZ94 848 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 GPN3Q9UHW5 284 aaPredicted RBP18.66■□□□□ 0.58
HOXC13-201ENST00000243056 VPS13AQ96RL7 3174 aa18.66■□□□□ 0.58
HOXC13-201ENST00000243056 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.65■□□□□ 0.58
HOXC13-201ENST00000243056 SSNA1O43805 119 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 POP7O75817 140 aaKnown RBP18.65■□□□□ 0.58
HOXC13-201ENST00000243056 RPP40O75818 363 aaKnown RBP18.65■□□□□ 0.58
HOXC13-201ENST00000243056 KCNK5O95279 499 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 TCRBP04435 133 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 SPP1P10451 314 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 ZNF3P17036 446 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 TNFRSF1BP20333 461 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 C9orf64Q5T6V5 341 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 ZNF565Q8N9K5 539 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 OR4C15Q8NGM1 316 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 PPP3R2Q96LZ3 170 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 AARSD1Q9BTE6 412 aaKnown RBP18.65■□□□□ 0.58
HOXC13-201ENST00000243056 ZFYVE1Q9HBF4 777 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 NLE1Q9NVX2 485 aaPredicted RBP18.65■□□□□ 0.58
HOXC13-201ENST00000243056 B4GALT6Q9UBX8 382 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 BTNL2Q9UIR0 455 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 MED16Q9Y2X0 877 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 WDFY4Q6ZS81 3184 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 TICRRQ7Z2Z1 1910 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 GABRR3A8MPY1 467 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 MBTPS2O43462 519 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 EPHX1P07099 455 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 ANXA8P13928 327 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 MC4RP32245 332 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 MMP12P39900 470 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 CSNK1DP48730 415 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 CDKN3Q16667 212 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 GSG1Q2KHT4 349 aa18.65■□□□□ 0.58
HOXC13-201ENST00000243056 WDR53Q7Z5U6 358 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms