RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 DPEP2Q9H4A9 486 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CLEC2DQ9UHP7 191 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF587BE7ETH6 402 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 TGOLN2O43493 480 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 FKTNO75072 461 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 DFFBO76075 338 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 TNFRSF1BP20333 461 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 MED27Q6P2C8 311 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 UBAC2Q8NBM4 344 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 OR5W2Q8NH69 310 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 FBXO32Q969P5 355 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 FOXRED1Q96CU9 486 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 BSCL2Q96G97 398 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 GSN-AS1Q9NRJ2 163 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 P2RX2Q9UBL9 471 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 FAM221BA6H8Z2 402 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 CBY3A6NI87 242 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 A8MVJ9 347 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 OR2F2O95006 317 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 CPEP16870 476 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 NDUFV1P49821 464 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 OR2F1Q13607 317 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 SLC5A12Q1EHB4 618 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 CEACAM20Q6UY09 585 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 OR14A16Q8NHC5 309 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 NSUN3Q9H649 340 aaKnown RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 A0A1B0GUH1 482 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 F10P00742 488 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 CRYBA1P05813 215 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 C8GP07360 202 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 DCNP07585 359 aaKnown RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 ST3GAL3Q11203 375 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 TPGS1Q6ZTW0 290 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 TRAPPC5Q8IUR0 188 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 MTERF1Q99551 399 aaKnown RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 KATNB1Q9BVA0 655 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 WASF3Q9UPY6 502 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 EIF3GO75821 320 aaKnown RBP eCLIP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 FGF18O76093 207 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 ALPPL2P10696 532 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 GABRR2P28476 465 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 MAT2AP31153 395 aaKnown RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 GDF5P43026 501 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 KHKP50053 298 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 RIN1Q13671 783 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 RTP2Q5QGT7 225 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 WSCD1Q658N2 575 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 B3GLCTQ6Y288 498 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 GALNTL5Q7Z4T8 443 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 LRRTM3Q86VH5 581 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 FUBP1Q96AE4 644 aaKnown RBP12.2□□□□□ -0.46
VAMP4-201ENST00000236192 SLC35G5Q96KT7 338 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 PTCHD1Q96NR3 888 aa12.2□□□□□ -0.46
VAMP4-201ENST00000236192 PIK3C2AO00443 1686 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF821O75541 412 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-201ENST00000236192 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 HSD3B1P14060 373 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 RHOQP17081 205 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 HNF1AP20823 631 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 UGT3A2Q3SY77 523 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 PRAMEF18Q5VWM3 479 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 CD163Q86VB7 1156 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 OR10R2Q8NGX6 335 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 NTMT1Q9BV86 223 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 FBXO44Q9H4M3 255 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 TMEFF2Q9UIK5 374 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-201ENST00000236192 TIMM13Q9Y5L4 95 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-201ENST00000236192 NPC1O15118 1278 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 PDYNP01213 254 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 CBX2Q14781 532 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-201ENST00000236192 SFXN4Q6P4A7 337 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 TOP6BLQ8N6T0 577 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 HMCESQ96FZ2 354 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 RNF32Q9H0A6 362 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 AGO1Q9UL18 857 aaKnown RBP12.19□□□□□ -0.46
VAMP4-201ENST00000236192 KCTD3Q9Y597 815 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 WASH3PC4AMC7 463 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 AP4M1O00189 453 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 CCR7P32248 378 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 FAM189BP81408 668 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 RGNQ15493 299 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 LTB4RQ15722 352 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 ARHGAP40Q5TG30 622 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 B3GNTL1Q67FW5 361 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-201ENST00000236192 PDXPQ96GD0 296 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 ATG10Q9H0Y0 220 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 WDR45Q9Y484 360 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 CFAP20Q9Y6A4 193 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms