RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PDGFBP01127 241 aaPredicted RBP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 HLA-DPB1P04440 258 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 GSTT2P0CG29 244 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 ADAM8P78325 824 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 GPLD1P80108 840 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 TARDBPQ13148 414 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 C6orf141Q5SZD1 244 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 ZCCHC12Q6PEW1 402 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 FRRS1Q6ZNA5 592 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 PLEKHG7Q6ZR37 379 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 TSEN15Q8WW01 171 aaKnown RBP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 ACOT12Q8WYK0 555 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 GATA6Q92908 595 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 TMEM125Q96AQ2 219 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 SLC6A16Q9GZN6 736 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 PCED1AQ9H1Q7 454 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 SEMA6CQ9H3T2 930 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 RANBP3Q9H6Z4 567 aaPredicted RBP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 SERINC1Q9NRX5 453 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 MEMO1Q9Y316 297 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 DAPL1A0PJW8 107 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 TMX2-CTNND1H3BSU7 103 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 TRAPPC6AO75865 159 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 CCBE1Q6UXH8 406 aaPredicted RBP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 QSOX2Q6ZRP7 698 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 GOLM1Q8NBJ4 401 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 OR10H4Q8NGA5 316 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 NR4A3Q92570 626 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 TBC1D20Q96BZ9 403 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 ULBP3Q9BZM4 244 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 PLAC1Q9HBJ0 212 aa8.87□□□□□ -0.99
CCDC113-201ENST00000219299 PAK1IP1Q9NWT1 392 aaPredicted RBP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 PAQR5Q9NXK6 330 aaPredicted RBP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 NUP214P35658 2090 aaPredicted RBP8.87□□□□□ -0.99
CCDC113-201ENST00000219299 GABRR3A8MPY1 467 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF701M0R085 212 aaPredicted RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 PIAS2O75928 621 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 CLIC3O95833 236 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ST6GAL1P15907 406 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 DDCP20711 480 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ZXDAP98168 799 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 FZD2Q14332 565 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 PAGE3Q5JUK9 113 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 NUP54Q7Z3B4 507 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ANKFN1Q8N957 763 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ARHGAP9Q9BRR9 750 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 INPP5KQ9BT40 448 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 MGAT4AQ9UM21 535 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 SVILO95425 2214 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ELOA3DA6NLF2 546 aaPredicted RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ANXA2P2A6NMY6 339 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 HCN1O60741 890 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 TSPAN12O95859 305 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 HMGN1P05114 100 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ANXA2P07355 339 aaKnown RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ELK4P28324 431 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 OR1E2P47887 323 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 AP2S1P53680 142 aaPredicted RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 GABARAPL2P60520 117 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 SPEM2Q0P670 501 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 SERTAD2Q14140 314 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 VMACQ2NL98 169 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ELOA3BQ3SY89 546 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 TMEM17Q86X19 198 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ELOA3Q8NG57 546 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 OR9A2Q8NGT5 310 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 LINC00615Q96LM1 132 aaPredicted RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 OR51I1Q9H343 314 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 KCNK13Q9HB14 408 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 TCF7L1Q9HCS4 588 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 TREM1Q9NP99 234 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 TMEM9BQ9NQ34 198 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 FXYD6-FXYD2A0A087WZ82 144 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 A8MV72 311 aaPredicted RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 SCO2O43819 266 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 CDC40O60508 579 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 TRIM3O75382 744 aaPredicted RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 SCGNO76038 276 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 NR2C1P13056 603 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 NME1P15531 152 aaKnown RBP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 PTNP21246 168 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 F8A1P23610 371 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 MC3RP41968 323 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 PLGLB1Q02325 96 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 PLCXD2Q0VAA5 305 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 NFATC3Q12968 1075 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 FADDQ13158 208 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 KCNAB1Q14722 419 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 GPR19Q15760 415 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.86□□□□□ -0.99
CCDC113-201ENST00000219299 SPERTQ8NA61 448 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 MFSD9Q8NBP5 474 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ADAMTS18Q8TE60 1221 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 SLC25A36Q96CQ1 311 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF285Q96NJ3 590 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 BCL7BQ9BQE9 202 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 FUZQ9BT04 418 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 FXYD6Q9H0Q3 95 aa8.86□□□□□ -0.99
CCDC113-201ENST00000219299 FSCN3Q9NQT6 498 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms