RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Amigo3Q8C2S7 508 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Vmn1r30Q8R2D2 302 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Pomt1Q8R2R1 746 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr1019Q8VGS3 310 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Tmem205Q91XE8 189 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Wdr73Q9CWR1 371 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Mrpl21Q9D1N9 209 aaKnown RBP13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Mgat4dQ9D4R2 373 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Ropn1lQ9EQ00 218 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Klrc1Q9Z202 244 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Gm12695A2AGB2 545 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Gm5901D3YVJ1 333 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Man2b2O54782 1018 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Rad52P43352 420 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Entpd6Q3U0P5 455 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Nr0b2Q62227 260 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Cdh24Q6PFX6 781 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Vtcn1Q7TSP5 283 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Colec10Q8CF98 277 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Slc43a2Q8CGA3 568 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Apbb3Q8R1C9 486 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 NifkQ91VE6 317 aaKnown RBP13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Plpp3Q99JY8 312 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Nrip3Q9JJR9 240 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr634-ps1A0A1B0GRN7 318 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Fam71f2B2RXB0 297 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Gm10721J3QPJ9 223 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 PgfP49764 158 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 AbatP61922 500 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 UqcrhP99028 89 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Tmprss11bQ14C59 416 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Mef2aQ60929 498 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Crtc1Q68ED7 630 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Fam205cQ80YD3 371 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 QpctlQ8BH73 383 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 PcgF3Q8BTQ0 241 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Q8BZE1 841 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Cacnb4Q8R0S4 519 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Slc22a6Q8VC69 545 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Macrod1Q922B1 323 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Zswim2Q9D9X6 631 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Cdrt4Q9DA64 179 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Cmtm2aQ9DAR1 169 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Eif3fQ9DCH4 361 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Slc7a7Q9Z1K8 510 aa13.95□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 1700017D01RikG5E851 209 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Cops3O88543 423 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Matn4O89029 624 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Irf1P15314 329 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Vmn1r223Q5SSA0 361 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Cldn19Q9ET38 224 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Myh3P13541 1940 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Sult2a3D3Z1W5 285 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Gm9008E9PVG0 424 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Gm21797J3QNW5 180 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 CskP41241 450 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Rab11bP46638 218 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Cav3P51637 151 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Grhl3Q5FWH3 603 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Nfatc2Q60591 927 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Sdc3Q64519 442 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr503Q7TRU8 323 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Pdcd2lQ8C5N5 364 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Hspa12aQ8K0U4 675 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr133Q8VG94 312 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr643Q8VGY1 314 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 CrygnQ8VHL5 183 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Gtpbp3Q923K4 492 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Rp2Q9EPK2 347 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Slco1a1Q9QXZ6 670 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Myh10Q61879 1976 aaKnown RBP13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Vmn2r48E9Q5D8 855 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Vmn2r69G3XA45 850 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Hoxd1Q01822 328 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Eri2Q5BKS4 688 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr381Q5SSP0 311 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr598Q7TRR2 319 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 LsrQ99KG5 594 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Glo1Q9CPU0 184 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Q9D454 513 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 TrirQ9D735 173 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr560A0A1B0GSU5 314 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 4930455H04RikD3Z622 58 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Vmn1r25H3BLP0 302 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Gm14496K7N5U4 849 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Tlx3O55144 291 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Mapk14P47811 360 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Slc37a3Q3TIT8 494 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Spire1Q52KF3 598 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Foxd3Q61060 465 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Dyrk1aQ61214 763 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Meig1Q61845 88 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Sf1Q64213 653 aaKnown RBP13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Zfp324Q78F42 583 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr1318Q7TQW6 320 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Dcun1d4Q8CCA0 292 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Glis1Q8K1M4 789 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Olfr1317Q8VF84 316 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Mrpl17Q9D8P4 176 aa13.94□□□□□ -0.18
Pcdha1-201ENSMUST00000070797 Mmp19Q9JHI0 527 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms