RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MIOXQ9UGB7 285 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 MRTO4Q9UKD2 239 aaKnown RBP11.33□□□□□ -0.6
CAPN3-221ENST00000638141 ACSL6Q9UKU0 697 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
CAPN3-221ENST00000638141 CENPFP49454 3210 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 RAB19A4D1S5 217 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 OR6C75A6NL08 312 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 DBX1A6NMT0 343 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 C2orf74A8MZ97 194 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CXCL11O14625 94 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CHST10O43529 356 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 PRAMEF11O60813 436 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 NCR1O76036 304 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 PDYNP01213 254 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 AMD1P17707 334 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 DGKAP23743 735 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 MST1P26927 711 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 THBS2P35442 1172 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 FAM189BP81408 668 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 EFNB1P98172 346 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 EIF2S3LQ2VIR3 472 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 C10orf91Q5T1B1 145 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF425Q6IV72 752 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CERS6Q6ZMG9 384 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 MOB3CQ70IA8 216 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 L3MBTL4Q8NA19 623 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ZFPM2Q8WW38 1151 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ASB13Q8WXK3 278 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 BRI3BPQ8WY22 251 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 RGMAQ96B86 450 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF582Q96NG8 517 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 PTPN18Q99952 460 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 UTP23Q9BRU9 249 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 BTBD1Q9H0C5 482 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 RERGLQ9H628 205 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 TMEM30AQ9NV96 361 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 RASL12Q9NYN1 266 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 NLGN3Q9NZ94 848 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 KCNE1BA0A087WTH5 132 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CCL15-CCL14A0A0B4J2E2 113 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 A0A0G2JLL6 359 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 A0A1B0GTQ1 180 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 MYBPHLA2RUH7 354 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 NAP1L6A6NFF2 107 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ARGFXA6NJG6 315 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 DISC1C4P0D8 188 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CDC123O75794 336 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 EGFP01133 1207 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 PAX6P26367 422 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ACADLP28330 430 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 MC4RP32245 332 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 KCNJ3P48549 501 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 SRP9P49458 86 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 MLLT1Q03111 559 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CRHR2Q13324 411 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 TRAM2Q15035 370 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 SF1Q15637 639 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CCL15Q16663 113 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 MINDY4Q4G0A6 757 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 SGO1Q5FBB7 561 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 OR2G6Q5TZ20 316 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 KIAA1161Q6NSJ0 714 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 SLC16A13Q7RTY0 426 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 LRRC70Q7Z2Q7 622 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 PRRT2Q7Z6L0 340 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 PUSL1Q8N0Z8 303 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 OR14A16Q8NHC5 309 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 GTF3AQ92664 365 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 TSNAXQ99598 290 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 EGFL8Q99944 293 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
CAPN3-221ENST00000638141 FAIM2Q9BWQ8 316 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ENKD1Q9H0I2 346 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 TMEM38AQ9H6F2 299 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 WDR26Q9H7D7 661 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 ZFP57Q9NU63 452 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 CFAP97Q9P2B7 532 aa11.32□□□□□ -0.6
CAPN3-221ENST00000638141 C2orf78A6NCI8 922 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 C5orf52A6NGY3 159 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 TREHO43280 583 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 LCMT2O60294 686 aaKnown RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 IL5P05113 134 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 UBBP0CG47 229 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 UBCP0CG48 685 aaKnown RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 CCR6P51684 374 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 CTSCP53634 463 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 RPS27AP62979 156 aaKnown RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 UBA52P62987 128 aaKnown RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 NOGQ13253 232 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 TMEM255AQ5JRV8 349 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 PSAPL1Q6NUJ1 521 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 NOXRED1Q6NXP6 359 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 Q6ZTK2 550 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 GATAD2BQ8WXI9 593 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 COPS8Q99627 209 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms