RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GMEB1Q9Y692 573 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 NCOR2Q9Y618 2525 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 SEC14L2O76054 403 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 ITPKBP27987 946 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 ISL1P61371 349 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 NEDD8Q15843 81 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 RNF44Q7L0R7 432 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 PTOV1Q86YD1 416 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 PHF10Q8WUB8 498 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 CHTF18Q8WVB6 975 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 OR5P2Q8WZ92 322 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 CSF3RQ99062 836 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 ARMC7Q9H6L4 198 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 EXO1Q9UQ84 846 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 GABRR3A8MPY1 467 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 M0R3G1 203 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 BCKDKO14874 412 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 TCEA1P23193 301 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 VEZF1Q14119 521 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 SLCO6A1Q86UG4 719 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 CHDHQ8NE62 594 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 CXorf21Q9HAI6 301 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 C14orf105Q9NVL8 296 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 ACSL6Q9UKU0 697 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 U3KQV3 271 aa11.66□□□□□ -0.54
SYNGAP1-207ENST00000628646 MN1Q10571 1320 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 IGKV1-8A0A0C4DH67 115 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 PGRMC2O15173 223 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 ANXA8P13928 327 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 ACVR2AP27037 513 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 STT3AP46977 705 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 RUNX2Q13950 521 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 PAPD4Q6PIY7 484 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 ZNF773Q6PK81 442 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 LRRC56Q8IYG6 542 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 NUP43Q8NFH3 380 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 ZNF420Q8TAQ5 688 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 RAB8BQ92930 207 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 FKBP10Q96AY3 582 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 TM4SF18Q96CE8 201 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 Q9N2J8 555 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 KRCC1Q9NPI7 259 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 PTGES3LE9PB15 166 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 H0YIG0 161 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 TNFRSF11BO00300 401 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 IFNW1P05000 195 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 ERGP11308 486 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 TPP2P29144 1249 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 TRA2BP62995 288 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 BTG2P78543 158 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 SPIBQ01892 262 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 PPP1R8Q12972 351 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 DNASE1L3Q13609 305 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 SCARB2Q14108 478 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 DSG2Q14126 1118 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 CPZQ66K79 652 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 OR8J2Q8NGG1 315 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 RAB33BQ9H082 229 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■■■□□ 17.6
SYNGAP1-207ENST00000628646 SVILO95425 2214 aa11.65□□□□□ -0.54
SYNGAP1-207ENST00000628646 MC3RP41968 323 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF750Q32MQ0 723 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 VASH2Q86V25 355 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 MMP21Q8N119 569 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 VWA5B2Q8N398 1253 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR56A1Q8NGH5 318 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR10Q1Q8NGQ4 319 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 SUN3Q8TAQ9 357 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 GIPC3Q8TF64 312 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 KCNE4Q8WWG9 221 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 RPS6KB2Q9UBS0 482 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRODH2Q9UF12 536 aa11.65□□□□□ -0.55
SYNGAP1-207ENST00000628646 A0A1W2PR48 441 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CNOT3O75175 753 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ALOX12BO75342 701 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZGLP1P0C6A0 271 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 PCMT1P22061 227 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 DSTNP60981 165 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 RPS26P62854 115 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CDK6Q00534 326 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF574Q6ZN55 896 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 EIF3MQ7L2H7 374 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 TSEN54Q7Z6J9 526 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF605Q86T29 641 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 BPIFB6Q8NFQ5 453 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 TSLPQ969D9 159 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 TUBA1CQ9BQE3 449 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 GABARAPL1Q9H0R8 117 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 EHD3Q9NZN3 535 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CALML5Q9NZT1 146 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 DUXAA6NLW8 204 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 RNASET2O00584 256 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 NDUFB5O43674 189 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 GIMD1P0DJR0 217 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CPMP14384 443 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 IL7RP16871 459 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 GPX2P18283 190 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRKACGP22612 351 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms