RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 STRADBQ9C0K7 418 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 SHARPINQ9H0F6 387 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 THAP2Q9H0W7 228 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 GHITMQ9H3K2 345 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 SMYD3Q9H7B4 428 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 MED20Q9H944 212 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 AKIRIN1Q9H9L7 192 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-215ENST00000625395 DMAP1Q9NPF5 467 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-215ENST00000625395 FAM207AQ9NSI2 230 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-215ENST00000625395 BLOC1S4Q9NUP1 217 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 ASF1BQ9NVP2 202 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 TBC1D7Q9P0N9 293 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 TMEM9Q9P0T7 183 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 HMGXB4Q9UGU5 601 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 STUB1Q9UNE7 303 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 ZNF510Q9Y2H8 683 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 NTNG1Q9Y2I2 539 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 CITO14578 2027 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 CROCCQ5TZA2 2017 aa3.12□□□□□ -1.91
SEC23A-215ENST00000625395 DIDO1Q9BTC0 2240 aaKnown RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 IGHV5-10-1A0A0J9YXX1 117 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 EDDM13A0A1B0GTR0 161 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 ZSCAN5CA6NGD5 496 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 IGLON5A6NGN9 336 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 C19orf84I3L1E1 186 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 K7ERQ8 282 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 ZNF195O14628 629 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 IDH3BO43837 385 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 IGHV2-70P01814 119 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 SLC2A2P11168 524 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CD99P14209 185 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 TCN2P20062 427 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 HNRNPA2B1P22626 353 aaKnown RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CD82P27701 267 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CD1CP29017 333 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 ADORA2BP29275 332 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 GCH1P30793 250 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CSTF2P33240 577 aaKnown RBP eCLIP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 RPL21P46778 160 aaKnown RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CCL11P51671 97 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 PFN3P60673 137 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 KLC1Q07866 573 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CHAF1BQ13112 559 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 EFTUD2Q15029 972 aaKnown RBP eCLIP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 HERC3Q15034 1050 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CA9Q16790 459 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CBWD6Q4V339 395 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 PHLDA2Q53GA4 152 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 SLC25A53Q5H9E4 307 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CBWD3Q5JTY5 395 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 UGT3A1Q6NUS8 523 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 ZNF343Q6P1L6 599 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 GPBP1Q86WP2 473 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CCDC83Q8IWF9 413 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CDK20Q8IZL9 346 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 Q8N377 158 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CARNMT1Q8N4J0 409 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 NUP37Q8NFH4 326 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CCL4L1Q8NHW4 92 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 VANGL1Q8TAA9 524 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 RASL10AQ92737 203 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 ART4Q93070 314 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CENPTQ96BT3 561 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 OMA1Q96E52 524 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 PRICKLE1Q96MT3 831 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 RUFY1Q96T51 708 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 OLFM1Q99784 485 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 TIPINQ9BVW5 301 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 ST6GALNAC4Q9H4F1 302 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 FBXO44Q9H4M3 255 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 APMAPQ9HDC9 416 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 MRPL40Q9NQ50 206 aaKnown RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 FAM49BQ9NUQ9 324 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 NDE1Q9NXR1 346 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 RBAKQ9NYW8 714 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 CLIC5Q9NZA1 410 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 XPO7Q9UIA9 1087 aaKnown RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 APPL1Q9UKG1 709 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 GPR34Q9UPC5 381 aa3.11□□□□□ -1.91
SEC23A-215ENST00000625395 RPH3AQ9Y2J0 694 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 PTRH2Q9Y3E5 179 aaKnown RBP3.11□□□□□ -1.91
SEC23A-215ENST00000625395 LOC105371242A0A075B767 164 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 GLOD5A6NK44 160 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 H0YCG3 227 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 MKRN2OSH3BPM6 223 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 MCF2LO15068 1137 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 SLC7A4O43246 635 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 CEACAM4O75871 244 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 RALAP11233 206 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 PRKACGP22612 351 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 AKT2P31751 481 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 CA5AP35218 305 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 NUDT1P36639 197 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 TSFMP43897 325 aaKnown RBP3.1□□□□□ -1.91
SEC23A-215ENST00000625395 CASP4P49662 377 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 ST8SIA6P61647 398 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 MS4A2Q01362 244 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 E2F5Q15329 346 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 UGT3A2Q3SY77 523 aa3.1□□□□□ -1.91
SEC23A-215ENST00000625395 MOGAT2Q3SYC2 334 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms