RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 KLHL17Q6TDP4 642 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 B3GNT8Q7Z7M8 397 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 ENTHD1Q8IYW4 607 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 D2HGDHQ8N465 521 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 ZNF540Q8NDQ6 660 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 OR7G1Q8NGA0 311 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 OR9Q2Q8NGE9 314 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 OR13F1Q8NGS4 319 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 RAB2BQ8WUD1 216 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 MMABQ96EY8 250 aaPredicted RBP15.25■□□□□ 0.03
LDB3-208ENST00000623007 DOK1Q99704 481 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 G6PC3Q9BUM1 346 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 PRODH2Q9UF12 536 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 SERTAD3Q9UJW9 196 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 CFL2Q9Y281 166 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 SCN3AQ9NY46 2000 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 IGHV5-51A0A0C4DH38 117 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 EME2A4GXA9 379 aaPredicted RBP15.25■□□□□ 0.03
LDB3-208ENST00000623007 H3BSA7 217 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 M0R3H8 397 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 KIAA0513O60268 411 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 SDC3O75056 442 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 CYP7B1O75881 506 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 OR2B3O76000 313 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 NID1P14543 1247 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 ZXDAP98168 799 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 PTGES3Q15185 160 aaKnown RBP15.25■□□□□ 0.03
LDB3-208ENST00000623007 CLPPQ16740 277 aaPredicted RBP15.25■□□□□ 0.03
LDB3-208ENST00000623007 CNIH3Q8TBE1 160 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 SLC7A13Q8TCU3 470 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 GNPDA2Q8TDQ7 276 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 GPR151Q8TDV0 419 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 GAB3Q8WWW8 586 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 SLC41A2Q96JW4 573 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 STARD5Q9NSY2 213 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 RLIMQ9NVW2 624 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 UCKL1Q9NWZ5 548 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 KCNE3Q9Y6H6 103 aa15.25■□□□□ 0.03
LDB3-208ENST00000623007 TP53BP1Q12888 1972 aaPredicted RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 PTGES3LE9PB15 166 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 LAMTOR5O43504 91 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 HRO43593 1189 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 PCDHGA12O60330 932 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 BRINP1O60477 761 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 AGXTP21549 392 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 PAX7P23759 505 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 SIGLEC14Q08ET2 396 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 ZNF155Q12901 538 aaPredicted RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 PMS2P3Q13401 168 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 DYNC1I2Q13409 638 aaKnown RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 PIN1Q13526 163 aaPredicted RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 NEDD8Q15843 81 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 DECR1Q16698 335 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 LAIR2Q6ISS4 152 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 PGBD2Q6P3X8 592 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 CASP12Q6UXS9 341 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 CLVS1Q8IUQ0 354 aaPredicted RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 TMEM52Q8NDY8 209 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 OR51Q1Q8NH59 317 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 MAFAQ8NHW3 353 aaPredicted RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 C9orf43Q8TAL5 461 aaPredicted RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 RORBQ92753 470 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 GTPBP3Q969Y2 492 aaKnown RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 NMD3Q96D46 503 aaKnown RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 PEX11GQ96HA9 241 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 ALOXE3Q9BYJ1 711 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 CUTCQ9NTM9 273 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 CLN6Q9NWW5 311 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 CNOT2Q9NZN8 540 aaKnown RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 RHCGQ9UBD6 479 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 FTSJ1Q9UET6 329 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 RNF6Q9Y252 685 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 EML5Q05BV3 1969 aa15.24■□□□□ 0.03
LDB3-208ENST00000623007 GOLGA4Q13439 2230 aaKnown RBP15.24■□□□□ 0.03
LDB3-208ENST00000623007 EFCAB10A6NFE3 127 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 SNTNA6NMZ2 147 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 TMEM150CB9EJG8 249 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 FAM227AF5H4B4 570 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 DNAJB6O75190 326 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 TRMUO75648 421 aaKnown RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 CHMP24386 653 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 CD1CP29017 333 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 EPHA8P29322 1005 aaPredicted RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 IDH2P48735 452 aaKnown RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 DHPSP49366 369 aaPredicted RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 GFERP55789 205 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 SNRPGP62308 76 aaKnown RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 PSPHP78330 225 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 TARDBPQ13148 414 aaKnown RBP eCLIP15.23■□□□□ 0.03
LDB3-208ENST00000623007 LSAMPQ13449 338 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 NPTX1Q15818 432 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 ENTPD8Q5MY95 495 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 SLX4IPQ5VYV7 408 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 XAF1Q6GPH4 301 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 PODNL1Q6PEZ8 512 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 CMIPQ8IY22 773 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 SLC35F3Q8IY50 421 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 RNF113BQ8IZP6 322 aaKnown RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 SLC25A45Q8N413 288 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 OR4K5Q8NGD3 323 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 293.9 ms