RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 OR52N2Q8NGI0 321 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 ANGPTL6Q8NI99 470 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 PHF21AQ96BD5 680 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 C7orf34Q96L11 122 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 OR51I1Q9H343 314 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 C1GALT1Q9NS00 363 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 DENND4CQ5VZ89 1909 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 IGKV1-8A0A0C4DH67 115 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 C4orf51C9J302 202 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 UGT2B17O75795 530 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 CDRT1O95170 752 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 KIR2DL3P43628 341 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 RAB28P51157 221 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 TATDN3Q17R31 274 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 C7orf57Q8NEG2 295 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 AHCYL2Q96HN2 611 aaKnown RBP13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 MS4A8Q9BY19 250 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 BHLHE41Q9C0J9 482 aaPredicted RBP13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 DNAJC27Q9NZQ0 273 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 SLC23A1Q9UHI7 598 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 POLHQ9Y253 713 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 NTNG1Q9Y2I2 539 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 V9GYH0 126 aa13.62□□□□□ -0.23
SHROOM1-208ENST00000617339 PLXNB3Q9ULL4 1909 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 TPRP12270 2363 aaKnown RBP13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 CIB4A0PJX0 185 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 SNTNA6NMZ2 147 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 GMFGO60234 142 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 ADH1BP00325 375 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 GASTP01350 101 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 MVDP53602 400 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 ADPRHP54922 357 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 CAV3P56539 151 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 PRDX1Q06830 199 aaKnown RBP13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 C19orf57Q0VDD7 668 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 MAP4K2Q12851 820 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 TARDBPQ13148 414 aaKnown RBP eCLIP13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 SLC9A5Q14940 896 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 OR4C11Q6IEV9 310 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 NACC2Q96BF6 587 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 MSANTD3Q96H12 275 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 HRASLS5Q96KN8 279 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 SIGLEC11Q96RL6 698 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 TRIM45Q9H8W5 580 aaPredicted RBP13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 NLKQ9UBE8 527 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 BTNL2Q9UIR0 455 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 ENTPD4Q9Y227 616 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 ANGPT4Q9Y264 503 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 A3GALT2U3KPV4 340 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 NPIPA5A0A0B4J1W7 369 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 NPIPA7E9PJI5 369 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 C5orf67F2Z3F1 127 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 PRMT3O60678 531 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 B4GALT2O60909 372 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 HMGN2P05204 90 aaKnown RBP13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 NPIPA8P0DM63 369 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 HSD3B1P14060 373 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 ALAS2P22557 587 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 HSD3B2P26439 372 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 BSGP35613 385 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 GGT2P36268 569 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 DUSP2Q05923 314 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 CCNJQ5T5M9 372 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 Q7L0L9 218 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 CDH24Q86UP0 819 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 LAS2Q8IYD9 372 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 VWA5B2Q8N398 1253 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 OR9A2Q8NGT5 310 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 ZFAND1Q8TCF1 268 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 C11orf24Q96F05 449 aaPredicted RBP13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 GON7Q9BXV9 100 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 IL21RQ9HBE5 538 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 CLEC2DQ9UHP7 191 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 ALG5Q9Y673 324 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 PTPRSQ13332 1948 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 CEP250Q9BV73 2442 aa13.61□□□□□ -0.23
SHROOM1-208ENST00000617339 C17orf113A0A1B0GUU1 675 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 CELA2BP08218 269 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 PKLRP30613 574 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 AKT2P31751 481 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 SLC9A3P48764 834 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 MRPL28Q13084 256 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 RPE65Q16518 533 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 TSEN54Q7Z6J9 526 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 ACOT4Q8N9L9 421 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 OR9Q1Q8NGQ5 310 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 DNAJA3Q96EY1 480 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 HDAC8Q9BY41 377 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 ADAP2Q9NPF8 381 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 MCUBQ9NWR8 336 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 ZNF226Q9NYT6 803 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 TMCC3Q9ULS5 477 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 A0A1W2PPV9 198 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 B8ZZF3 427 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 LRRTM2O43300 516 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 LDB3O75112 727 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 DDCP20711 480 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 MC3RP41968 323 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 PPP1CAP62136 330 aa13.6□□□□□ -0.23
SHROOM1-208ENST00000617339 HNRNPA0Q13151 305 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms