RNA–Protein interactions for RNA: ENST00000615445.4

PTPRJ-208, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRJ, Length 4,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-208ENST00000615445 HOXC5Q00444 222 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 METTL4Q8N3J2 472 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 FRMD6Q96NE9 622 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 HOXD1Q9GZZ0 328 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 USP22Q9UPT9 525 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 PCDHA9Q9Y5H5 950 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 NUDT7P0C024 238 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 TNFRSF4P43489 277 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 LPAL2Q16609 132 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 SLCO4C1Q6ZQN7 724 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 CBLL1Q75N03 491 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 IQCF2Q8IXL9 164 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 PINK1Q9BXM7 581 aa19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 CCDC59Q9P031 241 aaKnown RBP19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 GMPR2Q9P2T1 348 aaKnown RBP19.54■□□□□ 0.72
PTPRJ-208ENST00000615445 C17orf105B2RV13 164 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 FMO6PO60774 539 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 IL33O95760 270 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 HOXA9P31269 272 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CXCL12P48061 93 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 TRA2BP62995 288 aaKnown RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 NFATC3Q12968 1075 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 RAET1LQ5VY80 246 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 LHX8Q68G74 356 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 TMED4Q7Z7H5 227 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CYB561A3Q8NBI2 242 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 ZNF548Q8NEK5 533 aaPredicted RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 RXFP3Q9NSD7 469 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CXXC1Q9P0U4 656 aaPredicted RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 NCDNQ9UBB6 729 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CASC3O15234 703 aaKnown RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 B4GAT1O43505 415 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 VAMP1P23763 118 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 ACY1Q03154 408 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 APOFQ13790 326 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 PRAMEF17Q5VTA0 474 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 BCL7CQ8WUZ0 217 aaPredicted RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 GATA6Q92908 595 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.53■□□□□ 0.724e-6■■■■■ 29.1
PTPRJ-208ENST00000615445 C14orf119Q9NWQ9 140 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 LOC100509620A0A075B734 347 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 PLOD2O00469 737 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 KDM4BO94953 1096 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 FARS2O95363 451 aaKnown RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CD38P28907 300 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CTXN1P60606 82 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 POU4F2Q12837 409 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 ABCA11PQ4W5N1 156 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 L3MBTL4Q8NA19 623 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 ANKK1Q8NFD2 765 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CHFRQ96EP1 664 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CNN2Q99439 309 aaKnown RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 BEX2Q9BXY8 128 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 BEX1Q9HBH7 125 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 ERVK-19Q9WJR5 959 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 FOXE1O00358 373 aaPredicted RBP19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 ZDHHC11BP0C7U3 371 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 TRAM1Q15629 374 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CARD17Q5XLA6 110 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 GLT8D1Q68CQ7 371 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 CPOQ8IVL8 374 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 TMEM168Q9H0V1 697 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 SMURF1Q9HCE7 757 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 PCDHGA8Q9Y5G5 932 aa19.53■□□□□ 0.72
PTPRJ-208ENST00000615445 GKN3PP0CG01 181 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 AP2S1P53680 142 aaPredicted RBP19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 MAD2L1BPQ15013 274 aaPredicted RBP19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 SYPL1Q16563 259 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 TBC1D25Q3MII6 688 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 CCDC36Q8IYA8 594 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 CDS1Q92903 461 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 PPP1R14BQ96C90 147 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 CD6P30203 668 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 BMXP51813 675 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 UBQLNLQ8IYU4 475 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 SLC37A3Q8NCC5 494 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 TAAR2Q9P1P5 351 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 ABCG2Q9UNQ0 655 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 PADI2Q9Y2J8 665 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 M0R129 80 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 AHRP35869 848 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 PER3P56645 1201 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 MAMDC2Q7Z304 686 aaPredicted RBP19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 MEX3DQ86XN8 651 aaKnown RBP19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 ZNF619Q8N2I2 560 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 VN1R2Q8NFZ6 395 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 OR2T4Q8NH00 348 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 TRUB1Q8WWH5 349 aaKnown RBP19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 PMM1Q92871 262 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 POLE4Q9NR33 117 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 STUB1Q9UNE7 303 aa19.52■□□□□ 0.72
PTPRJ-208ENST00000615445 MAGEA12P43365 314 aa19.52■□□□□ 0.71
PTPRJ-208ENST00000615445 FKBP10Q96AY3 582 aa19.52■□□□□ 0.71
PTPRJ-208ENST00000615445 NPLQ9BXD5 320 aaPredicted RBP19.52■□□□□ 0.71
PTPRJ-208ENST00000615445 THAP10Q9P2Z0 257 aaPredicted RBP19.52■□□□□ 0.71
PTPRJ-208ENST00000615445 ATXN7L1Q9ULK2 861 aaPredicted RBP19.52■□□□□ 0.71
PTPRJ-208ENST00000615445 BAIAP2Q9UQB8 552 aa19.52■□□□□ 0.71
PTPRJ-208ENST00000615445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.51■□□□□ 0.71
PTPRJ-208ENST00000615445 LRRN3E7EW58 273 aa19.51■□□□□ 0.71
PTPRJ-208ENST00000615445 NUDT1P36639 197 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms