RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CEBPBP17676 345 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 NELFEP18615 380 aaKnown RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 TAC1P20366 129 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ATP6V1B2P21281 511 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 MATN1P21941 496 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 GABRR1P24046 479 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 CYP2F1P24903 491 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 GTF2E2P29084 291 aaKnown RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ASPAP45381 313 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 MTHFSP49914 203 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 IDH3GP51553 393 aaPredicted RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 CCR8P51685 355 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 KCNK10P57789 538 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 PKIAP61925 76 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 RPS15P62841 145 aaKnown RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SIM1P81133 766 aaPredicted RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ST3GAL1Q11201 340 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 MTAPQ13126 283 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 IL18R1Q13478 541 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ARHGEF7Q14155 803 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 TTLL4Q14679 1199 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF239Q16600 458 aaKnown RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 TAZQ16635 292 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 UGT8Q16880 541 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 TMEM201Q5SNT2 666 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 NOL9Q5SY16 702 aaKnown RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SYT6Q5T7P8 510 aaPredicted RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 TSTD2Q5T7W7 516 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ABLIM2Q6H8Q1 611 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF790Q6PG37 636 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 PAQR3Q6TCH7 311 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 MPZL3Q6UWV2 235 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 FAM151BQ6UXP7 276 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SLC35D2Q76EJ3 337 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 GRASPQ7Z6J2 395 aaPredicted RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ANGPTL5Q86XS5 388 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SIAH3Q8IW03 269 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 DNAJC22Q8N4W6 341 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 OR5M8Q8NGP6 311 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 OR13C9Q8NGT0 318 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 RHOXF1Q8NHV9 184 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 C16orf78Q8WTQ4 265 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 PHF10Q8WUB8 498 aaKnown RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SELENOMQ8WWX9 145 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 PERPQ96FX8 193 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 MED8Q96G25 268 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SLC35A4Q96G79 324 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 C1orf159Q96HA4 380 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 OR14A2Q96R54 314 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 CRAMP1Q96RY5 1269 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 RNF2Q99496 336 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SLC30A2Q9BRI3 323 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 FICDQ9BVA6 458 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 CCDC90BQ9GZT6 254 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 UBQLN3Q9H347 655 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 DPEP2Q9H4A9 486 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 NXF3Q9H4D5 531 aaKnown RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SOX17Q9H6I2 414 aaPredicted RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF552Q9H707 407 aaPredicted RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 TMEM185BQ9H7F4 350 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ANKHQ9HCJ1 492 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 TMEM248Q9NWD8 314 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 PAK1IP1Q9NWT1 392 aaPredicted RBP2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SEMA5BQ9P283 1151 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 LPAR3Q9UBY5 353 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 SLC27A6Q9Y2P4 619 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF451Q9Y4E5 1061 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 MMP24Q9Y5R2 645 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 BCL9LQ86UU0 1499 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 UNC13BO14795 1591 aa2.86□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF142P52746 1687 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 A0A0A6YYC8 382 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ST20-MTHFSA0A0A6YYL1 179 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 MYOCOSA0A1B0GUC4 107 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 FAM74A7A6NL05 159 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PRR33A8MZF0 331 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 I3L1I5 382 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 M0QYT0 321 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 NFIBO00712 420 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 TP53I11O14683 189 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 NME2P1O60361 137 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CDC14BO60729 498 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 F13BP05160 661 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 MPOP05164 745 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CHRM2P08172 466 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 GABRA1P14867 456 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ADRA2CP18825 462 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PRDX5P30044 214 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CD80P33681 288 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ARR3P36575 388 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PTGFRP43088 359 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 EVX1P49640 407 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 LIMK2P53671 638 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RGS8P57771 180 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RAB11AP62491 216 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 IL11RAQ14626 422 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RAB39AQ14964 217 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 TMED2Q15363 201 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CHI3L2Q15782 390 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms