RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PPM1AP35813 382 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 GALNT2Q10471 571 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 OR1J1Q8NGS3 322 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 RDH14Q9HBH5 336 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 UBE2J1Q9Y385 318 aaPredicted RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 TMEM131LA2VDJ0 1609 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 MDFIC2A0A1B0GVS7 189 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 C5AR1P21730 350 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 LAP3P28838 519 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 PBX2P40425 430 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 HOXA1P49639 335 aaPredicted RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 SERPINA9Q86WD7 417 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ADGRG3Q86Y34 549 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 GLIS3Q8NEA6 775 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 OR51G2Q8NGK0 314 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ABCA1O95477 2261 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ADAM23O75077 832 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 FGF4P08620 206 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 TAF9Q16594 264 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 OTUD1Q5VV17 481 aaPredicted RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 B3GLCTQ6Y288 498 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 UTP4Q969X6 686 aaKnown RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 MCOLN1Q9GZU1 580 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 MCCC2Q9HCC0 563 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ADAP2Q9NPF8 381 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SERINC1Q9NRX5 453 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 PCDHGA2Q9Y5H1 932 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 TRIM77I1YAP6 450 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 FAM214AQ32MH5 1076 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 PLK5Q496M5 336 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 TMUB2Q71RG4 321 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 RNF180Q86T96 592 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SIDT2Q8NBJ9 832 aaKnown RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 TSGA13Q96PP4 275 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 XYLT2Q9H1B5 865 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 MRPS30Q9NP92 439 aaKnown RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 OLAHQ9NV23 265 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 VNN3Q9NY84 501 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 VAPAQ9P0L0 249 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SPTBN1Q01082 2364 aaKnown RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 CXorf49A8MYA2 514 aaPredicted RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 MEIS2O14770 477 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 CDH8P55286 799 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 RD3Q7Z3Z2 195 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 B3GNT8Q7Z7M8 397 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 UPRTQ96BW1 309 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SIGLEC10Q96LC7 697 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 EEF1E1-BLOC1S5C9J1V9 151 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 TPOP07202 933 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ALAS2P22557 587 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ITPKBP27987 946 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 IRF5Q13568 498 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 NHSL2Q5HYW2 709 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 NPRL2Q8WTW4 380 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 CD244Q9BZW8 370 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 PATZ1Q9HBE1 687 aaKnown RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 PRKAB1Q9Y478 270 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 AKAP6Q13023 2319 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 MROH6A6NGR9 719 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SCDO00767 359 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 JTBO76095 146 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 INSRRP14616 1297 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 CPT2P23786 658 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SLC6A9P48067 706 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 TECRLQ5HYJ1 363 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 VSIG10LQ86VR7 867 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ZNF680Q8NEM1 530 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ZNF75AQ96N20 296 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ZNF559Q9BR84 538 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ZNF226Q9NYT6 803 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 MED16Q9Y2X0 877 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 NUP98P52948 1817 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 TMEM82A0PJX8 343 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ADH1CP00326 375 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 DCTP40126 519 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 AQP2P41181 271 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 GCGRP47871 477 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ZNF461Q8TAF7 563 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SLC25A46Q96AG3 418 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 PCYT2Q99447 389 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SLC38A3Q99624 504 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 BRF2Q9HAW0 419 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 CPNE7Q9UBL6 633 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 DOCK11Q5JSL3 2073 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 HYKKA2RU49 373 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 FABP7O15540 132 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 MGMTP16455 207 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 CHRNA4P43681 627 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 C1QTNF8P60827 252 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
TTC28-208ENST00000612946 GPR142Q7Z601 462 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 ZBTB44Q8NCP5 570 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 SUSD6Q92537 303 aa8.35□□□□□ -1.07
TTC28-208ENST00000612946 CD8B2A6NJW9 211 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 C9JVG2 144 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 PPP5D1E7EU14 171 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SEPT4O43236 478 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 SIGLEC6O43699 453 aa8.34□□□□□ -1.07
TTC28-208ENST00000612946 CD8BP10966 210 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms