RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 C12orf71A8MTZ7 269 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 HMGN4O00479 90 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PRKYO43930 277 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 GPX5O75715 221 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 AIFM1O95831 613 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 IL7P13232 177 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PTPN6P29350 595 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 AKT2P31751 481 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 BLVRAP53004 296 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 RPS15AP62244 130 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 LRRC26Q2I0M4 334 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 C18orf63Q68DL7 685 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 LILRA6Q6PI73 481 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 JAZF1Q86VZ6 243 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 OR4F15Q8NGB8 312 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 TMEM163Q8TC26 289 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SPPL3Q8TCT6 385 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ASB15Q8WXK1 588 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 TSACCQ96A04 125 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 CDCA4Q9BXL8 241 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 POLDIP3Q9BY77 421 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 DPH1Q9BZG8 443 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SLC7A7Q9UM01 511 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SBF1O95248 1867 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ZNF236Q9UL36 1845 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 A0A1W2PPK0 400 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TYRP1P17643 537 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ACVR1BP36896 505 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 CASP3P42574 277 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 GJA8P48165 433 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ATP12AP54707 1039 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 SAXO2Q658L1 398 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 CNIH2Q6PI25 160 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 PAQR6Q6TCH4 344 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 SETD6Q8TBK2 473 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ACOT11Q8WXI4 607 aaPredicted RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 OMA1Q96E52 524 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TP63Q9H3D4 680 aaPredicted RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 MSRAQ9UJ68 235 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TMEM5Q9Y2B1 443 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ATG4BQ9Y4P1 393 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TET1Q8NFU7 2136 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 SERTM1A2A2V5 107 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TRIM64A6NGJ6 449 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 WASHC1A8K0Z3 465 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 B4GALT2O60909 372 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 UBXN7O94888 489 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 IL1AP01583 271 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ZNF888P0CJ79 500 aaPredicted RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 ACP2P11117 423 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ATP5A1P25705 553 aaKnown RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 HNRNPFP52597 415 aaKnown RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 SNRPGP62308 76 aaKnown RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 POU6F2P78424 691 aaPredicted RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 FLYWCH1Q4VC44 716 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 CCNJQ5T5M9 372 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 METRNLQ641Q3 311 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 WASH2PQ6VEQ5 465 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 CEACAM19Q7Z692 300 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 C12orf40Q86WS4 652 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TOMM5Q8N4H5 51 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 CDS1Q92903 461 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 AHCYL2Q96HN2 611 aaKnown RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 ZNF582Q96NG8 517 aaPredicted RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 DDX31Q9H8H2 851 aaKnown RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 SFXN1Q9H9B4 322 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 HRASLS2Q9NWW9 162 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TXNL4BQ9NX01 149 aaKnown RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 HSPB11Q9Y547 144 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 MEIOCA2RUB1 952 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ZNF670-ZNF695F2Z2N8 137 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 CLEC2LP0C7M8 214 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 HK1P19367 917 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 AK4P27144 223 aaPredicted RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 AHRP35869 848 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 GRK6P43250 576 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 LIM2P55344 173 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 MAB21L1Q13394 359 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 PON3Q15166 354 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 LRIT3Q3SXY7 679 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ENTPD8Q5MY95 495 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 ADAMTSL4Q6UY14 1074 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 B3GLCTQ6Y288 498 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 MFSD4AQ8N468 514 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 GOT1L1Q8NHS2 421 aaPredicted RBP8.17□□□□□ -1.1
LIG4-204ENST00000611712 APH1BQ8WW43 257 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 RELTQ969Z4 430 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 MS4A4EQ96PG1 132 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 OR52A5Q9H2C5 316 aa8.17□□□□□ -1.1
LIG4-204ENST00000611712 TRAV6A0A075B6T7 132 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 TRAPPC13A5PLN9 417 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 GREM1O60565 184 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SERPINA3P01011 423 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 GKN3PP0CG01 181 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 TCEA1P23193 301 aaKnown RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 RCVRNP35243 200 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 CLDN2P57739 230 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 VSX2P58304 361 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 RPS25P62851 125 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms