RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 SLC30A6Q6NXT4 461 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 RPTNQ6XPR3 784 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 EID3Q8N140 333 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 ZNF808Q8N4W9 903 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-208ENST00000604743 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 FBXO30Q8TB52 745 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 ARL8AQ96BM9 186 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 SARAFQ96BY9 339 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 TLCD1Q96CP7 247 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 SLC35A4Q96G79 324 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 ZNF764Q96H86 408 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-208ENST00000604743 VKORC1Q9BQB6 163 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 TP63Q9H3D4 680 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-208ENST00000604743 AKTIPQ9H8T0 292 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 Q9N2J8 555 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 ACSS1Q9NUB1 689 aaPredicted RBP13.18□□□□□ -0.3
TUBE1-208ENST00000604743 SPRR3Q9UBC9 169 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 CBLCQ9ULV8 474 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 MAPRE3Q9UPY8 281 aa13.18□□□□□ -0.3
TUBE1-208ENST00000604743 C15orf38-AP3S2A0A0A6YYH1 394 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 A0A1W2PRB8 838 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 OR14I1A6ND48 311 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 BCKDKO14874 412 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 HCN1O60741 890 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 ABCB7O75027 752 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
TUBE1-208ENST00000604743 PSMG1O95456 288 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 KITP10721 976 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 CYP4B1P13584 511 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 ENDOUP21128 410 aaKnown RBP13.17□□□□□ -0.3
TUBE1-208ENST00000604743 GABRA3P34903 492 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 FRKP42685 505 aaPredicted RBP13.17□□□□□ -0.3
TUBE1-208ENST00000604743 PNLIPRP2P54317 469 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 EMX2Q04743 252 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 DECR1Q16698 335 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 PGS1Q32NB8 556 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 WLSQ5T9L3 541 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 TIGD3Q6B0B8 471 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 ZNF787Q6DD87 383 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 RPRMLQ8N4K4 120 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 CEP70Q8NHQ1 597 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 NEIL3Q8TAT5 605 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 GPR151Q8TDV0 419 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 PIK3R3Q92569 461 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 SLC9A6Q92581 669 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 DMRTA2Q96SC8 542 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 PRPF18Q99633 342 aaKnown RBP13.17□□□□□ -0.3
TUBE1-208ENST00000604743 YIPF4Q9BSR8 244 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 C3orf14Q9HBI5 128 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 ACKR4Q9NPB9 350 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 NOP53Q9NZM5 478 aaKnown RBP13.17□□□□□ -0.3
TUBE1-208ENST00000604743 MARCOQ9UEW3 520 aaPredicted RBP13.17□□□□□ -0.3
TUBE1-208ENST00000604743 C15orf41Q9Y2V0 281 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 SLC6A5Q9Y345 797 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
TUBE1-208ENST00000604743 GXYLT2A0PJZ3 443 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 SNPHO15079 494 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 CFLARO15519 480 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 EMC8O43402 210 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 SCO2O43819 266 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 C6orf47O95873 294 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 PRPS1L1P21108 318 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 PTPN6P29350 595 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 DIO3P55073 304 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 PSPHP78330 225 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 SNTA1Q13424 505 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 CYP27C1Q4G0S4 372 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 EIPR1Q53HC9 387 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 WIPI1Q5MNZ9 446 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-208ENST00000604743 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 ATG16L1Q676U5 607 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 OR5M10Q6IEU7 315 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 XKRXQ6PP77 449 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
TUBE1-208ENST00000604743 MARVELD2Q8N4S9 558 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 JADE3Q92613 823 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 SDCCAG3Q96C92 435 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 OTUB1Q96FW1 271 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-208ENST00000604743 CHMP6Q96FZ7 201 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 RMND5BQ96G75 393 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-208ENST00000604743 C16orf58Q96GQ5 468 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 LMF2Q9BU23 707 aaKnown RBP13.16□□□□□ -0.3
TUBE1-208ENST00000604743 UBQLN3Q9H347 655 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 MANSC1Q9H8J5 431 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 ATAD3AQ9NVI7 634 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 THAP1Q9NVV9 213 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 HAO1Q9UJM8 370 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 CENPEQ02224 2701 aa13.16□□□□□ -0.3
TUBE1-208ENST00000604743 CRYBG3Q68DQ2 2970 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 FIGNL2A6NMB9 653 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 HPNP05981 417 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 LBPP18428 481 aa13.15□□□□□ -0.3
TUBE1-208ENST00000604743 TCEA1P23193 301 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 ELAVL4P26378 380 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 GRNP28799 593 aaKnown RBP13.15□□□□□ -0.3
TUBE1-208ENST00000604743 SLC18A1P54219 525 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms