RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ARSJQ5FYB0 599 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 NCMAPQ5T1S8 102 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 LRRN1Q6UXK5 716 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 LINGO2Q7L985 606 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 CMIPQ8IY22 773 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 AQP11Q8NBQ7 271 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 OR13D1Q8NGV5 346 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 TERB2Q8NHR7 220 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 CNIH3Q8TBE1 160 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 AMDHD1Q96NU7 426 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ATP6V0BQ99437 205 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SEPT5Q99719 369 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ATG101Q9BSB4 218 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 COMMD4Q9H0A8 199 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 OR51E2Q9H255 320 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 RIOX1Q9H6W3 641 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 WDR55Q9H6Y2 383 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 FBRSL1Q9HCM7 1045 aaKnown RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SLC6A20Q9NP91 592 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 RCC2Q9P258 522 aaKnown RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SLC17A6Q9P2U8 582 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 GPR52Q9Y2T5 361 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 OAS3Q9Y6K5 1087 aaKnown RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 COL1A2P08123 1366 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ZFC3H1O60293 1989 aaKnown RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 C22orf46C9J442 243 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 GFYI3L273 518 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SMAD9O15198 467 aaKnown RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SLC37A4O43826 429 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 NTSR2O95665 410 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 CRYGCP07315 174 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 RHOP08100 348 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ITGA5P08648 1049 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 HTR1EP28566 365 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SCNN1AP37088 669 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 RGS4P49798 205 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 KLF3P57682 345 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 INSM1Q01101 510 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SLC10A1Q14973 349 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 GOLGA7BQ2TAP0 167 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ASPRV1Q53RT3 343 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ZRANB3Q5FWF4 1079 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 C3orf38Q5JPI3 329 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 PCID2Q5JVF3 399 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 EXOSC6Q5RKV6 272 aaKnown RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 HIST2H3PS2Q5TEC6 136 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 B3GNT9Q6UX72 402 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 COLCA1Q6ZS62 124 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 LANCL3Q6ZV70 420 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 KCTD1Q719H9 257 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF573Q86YE8 665 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 TCEAL8Q8IYN2 117 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 CHST14Q8NCH0 376 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 OR56A4Q8NGH8 313 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SLC35B2Q8TB61 432 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 LKAAEAR1Q8TD35 194 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 CNOT9Q92600 299 aaKnown RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 CDKN2AIPNLQ96HQ2 116 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 PACRGQ96M98 296 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 GABARAPL1Q9H0R8 117 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 RASL12Q9NYN1 266 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 RBAKQ9NYW8 714 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-215ENST00000602574 NCDNQ9UBB6 729 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 GJD2Q9UKL4 321 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 BCS1LQ9Y276 419 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SLCO1B1Q9Y6L6 691 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 ANKRD31Q8N7Z5 1873 aa8.37□□□□□ -1.07
COMMD3-215ENST00000602574 SCN9AQ15858 1988 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SLIT2O94813 1529 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 TEX13DA0A0J9YY54 714 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MCRIP1C9JLW8 97 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 CLIC1O00299 241 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 INPP4BO15327 924 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 RGS11O94810 467 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 INHAP05111 366 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 UBBP0CG47 229 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 UBCP0CG48 685 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 CXCL2P19875 107 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ITGB7P26010 798 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MST1P26927 711 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MAS1LP35410 378 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 HCCSP53701 268 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 RPS27AP62979 156 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 UBA52P62987 128 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 TRA2BP62995 288 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 PPP3R1P63098 170 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MRPL58Q14197 206 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 RPS6KA2Q15349 733 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 PCGF3Q3KNV8 242 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SLC34A3Q8N130 599 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 RTL3Q8N8U3 475 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM163Q8TC26 289 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MFSD3Q96ES6 412 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NT5C1BQ96P26 610 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 EGFL8Q99944 293 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 GINS4Q9BRT9 223 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NLNQ9BYT8 704 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ELOVL4Q9GZR5 314 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms