RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 EXOC3L2Q2M3D2 409 aa15.08■□□□□ 0
USE1-208ENST00000600970 FRG2Q64ET8 278 aa15.08■□□□□ 0
USE1-208ENST00000600970 PODNL1Q6PEZ8 512 aa15.08■□□□□ 0
USE1-208ENST00000600970 LARP4Q71RC2 724 aaKnown RBP eCLIP15.08■□□□□ 0
USE1-208ENST00000600970 CREG2Q8IUH2 290 aa15.08■□□□□ 0
USE1-208ENST00000600970 ZNF611Q8N823 705 aa15.08■□□□□ 0
USE1-208ENST00000600970 FADS6Q8N9I5 356 aa15.08■□□□□ 0
USE1-208ENST00000600970 FNDC9Q8TBE3 224 aa15.08■□□□□ 0
USE1-208ENST00000600970 TM4SF18Q96CE8 201 aa15.08■□□□□ 0
USE1-208ENST00000600970 FRG2BQ96QU4 278 aa15.08■□□□□ 0
USE1-208ENST00000600970 DSN1Q9H410 356 aa15.08■□□□□ 0
USE1-208ENST00000600970 PSME2Q9UL46 239 aa15.08■□□□□ 0
USE1-208ENST00000600970 ZNF337Q9Y3M9 751 aa15.08■□□□□ 0
USE1-208ENST00000600970 TNPO3Q9Y5L0 923 aaKnown RBP15.08■□□□□ 0
USE1-208ENST00000600970 A0A087X1B8 175 aa15.07■□□□□ 0
USE1-208ENST00000600970 CCDC189A1A4V9 331 aa15.07■□□□□ 0
USE1-208ENST00000600970 HS3ST1O14792 307 aa15.07■□□□□ 0
USE1-208ENST00000600970 SEC14L5O43304 696 aa15.07■□□□□ 0
USE1-208ENST00000600970 GSTA2P09210 222 aa15.07■□□□□ 0
USE1-208ENST00000600970 HK1P19367 917 aa15.07■□□□□ 0
USE1-208ENST00000600970 IL12BP29460 328 aa15.07■□□□□ 0
USE1-208ENST00000600970 PNLIPRP2P54317 469 aa15.07■□□□□ 0
USE1-208ENST00000600970 CLDN20P56880 219 aa15.07■□□□□ 0
USE1-208ENST00000600970 CORO7P57737 925 aa15.07■□□□□ 0
USE1-208ENST00000600970 VEZF1Q14119 521 aa15.07■□□□□ 0
USE1-208ENST00000600970 ACAP2Q15057 778 aa15.07■□□□□ 0
USE1-208ENST00000600970 CLEC12BQ2HXU8 276 aa15.07■□□□□ 0
USE1-208ENST00000600970 FAM83EQ2M2I3 478 aa15.07■□□□□ 0
USE1-208ENST00000600970 RAET1LQ5VY80 246 aa15.07■□□□□ 0
USE1-208ENST00000600970 TTC19Q6DKK2 380 aaPredicted RBP15.07■□□□□ 0
USE1-208ENST00000600970 METTL2BQ6P1Q9 378 aaKnown RBP15.07■□□□□ 0
USE1-208ENST00000600970 NPSR1Q6W5P4 371 aa15.07■□□□□ 0
USE1-208ENST00000600970 FAM214BQ7L5A3 538 aa15.07■□□□□ 0
USE1-208ENST00000600970 COMMD6Q7Z4G1 85 aa15.07■□□□□ 0
USE1-208ENST00000600970 OR2M3Q8NG83 312 aa15.07■□□□□ 0
USE1-208ENST00000600970 ATP6V1E2Q96A05 226 aa15.07■□□□□ 0
USE1-208ENST00000600970 NTMT1Q9BV86 223 aa15.07■□□□□ 0
USE1-208ENST00000600970 CPSF2Q9P2I0 782 aaKnown RBP15.07■□□□□ 0
USE1-208ENST00000600970 ZNF175Q9Y473 711 aa15.07■□□□□ 0
USE1-208ENST00000600970 ZNF780BQ9Y6R6 833 aa15.07■□□□□ 0
USE1-208ENST00000600970 PCNX3Q9H6A9 2034 aa15.07■□□□□ 0
USE1-208ENST00000600970 H3BML4 177 aa15.06■□□□□ 0
USE1-208ENST00000600970 CCDC188H7C350 402 aa15.06■□□□□ 0
USE1-208ENST00000600970 BCAS2O75934 225 aaPredicted RBP15.06■□□□□ 0
USE1-208ENST00000600970 IFNA2P01563 188 aa15.06■□□□□ 0
USE1-208ENST00000600970 C2P06681 752 aa15.06■□□□□ 0
USE1-208ENST00000600970 PPP3CBP16298 524 aa15.06■□□□□ 0
USE1-208ENST00000600970 KRT20P35900 424 aa15.06■□□□□ 0
USE1-208ENST00000600970 CCNG1P51959 295 aa15.06■□□□□ 0
USE1-208ENST00000600970 GALNT1Q10472 559 aaPredicted RBP15.06■□□□□ 0
USE1-208ENST00000600970 ZNF628Q5EBL2 1059 aa15.06■□□□□ 0
USE1-208ENST00000600970 OR5M1Q8NGP8 315 aa15.06■□□□□ 0
USE1-208ENST00000600970 ZNF675Q8TD23 568 aa15.06■□□□□ 0
USE1-208ENST00000600970 EFHD2Q96C19 240 aaPredicted RBP15.06■□□□□ 0
USE1-208ENST00000600970 PLPPR2Q96GM1 343 aa15.06■□□□□ 0
USE1-208ENST00000600970 TMEM204Q9BSN7 226 aa15.06■□□□□ 0
USE1-208ENST00000600970 PLSCR4Q9NRQ2 329 aa15.06■□□□□ 0
USE1-208ENST00000600970 PPP4R1LQ9P1A2 415 aa15.06■□□□□ 0
USE1-208ENST00000600970 SLC12A4Q9UP95 1085 aa15.06■□□□□ 0
USE1-208ENST00000600970 OR2M5A3KFT3 312 aa15.05■□□□□ -0
USE1-208ENST00000600970 SCO2O43819 266 aa15.05■□□□□ -0
USE1-208ENST00000600970 AQP8O94778 261 aa15.05■□□□□ -0
USE1-208ENST00000600970 CTAGE8P0CG41 777 aa15.05■□□□□ -0
USE1-208ENST00000600970 EVI2BP34910 448 aa15.05■□□□□ -0
USE1-208ENST00000600970 ALDH9A1P49189 494 aa15.05■□□□□ -0
USE1-208ENST00000600970 RPS4XP62701 263 aaKnown RBP15.05■□□□□ -0
USE1-208ENST00000600970 MRPS25P82663 173 aaKnown RBP15.05■□□□□ -0
USE1-208ENST00000600970 IFT88Q13099 833 aa15.05■□□□□ -0
USE1-208ENST00000600970 TRAF3Q13114 568 aa15.05■□□□□ -0
USE1-208ENST00000600970 SGO1Q5FBB7 561 aa15.05■□□□□ -0
USE1-208ENST00000600970 C10orf62Q5T681 223 aaPredicted RBP15.05■□□□□ -0
USE1-208ENST00000600970 STAC2Q6ZMT1 411 aa15.05■□□□□ -0
USE1-208ENST00000600970 CCDC91Q7Z6B0 441 aa15.05■□□□□ -0
USE1-208ENST00000600970 HIPK1Q86Z02 1210 aa15.05■□□□□ -0
USE1-208ENST00000600970 CTAGE4Q8IX94 777 aa15.05■□□□□ -0
USE1-208ENST00000600970 CCDC116Q8IYX3 515 aa15.05■□□□□ -0
USE1-208ENST00000600970 METTL25Q8N6Q8 603 aa15.05■□□□□ -0
USE1-208ENST00000600970 OR4N2Q8NGD1 307 aa15.05■□□□□ -0
USE1-208ENST00000600970 FBF1Q8TES7 1133 aa15.05■□□□□ -0
USE1-208ENST00000600970 AKAP1Q92667 903 aaKnown RBP eCLIP15.05■□□□□ -0
USE1-208ENST00000600970 KAT2AQ92830 837 aa15.05■□□□□ -0
USE1-208ENST00000600970 VSTM2LQ96N03 204 aa15.05■□□□□ -0
USE1-208ENST00000600970 GPR78Q96P69 363 aa15.05■□□□□ -0
USE1-208ENST00000600970 REG4Q9BYZ8 158 aa15.05■□□□□ -0
USE1-208ENST00000600970 DPH5Q9H2P9 285 aa15.05■□□□□ -0
USE1-208ENST00000600970 FOLH1BQ9HBA9 442 aa15.05■□□□□ -0
USE1-208ENST00000600970 ZBTB26Q9HCK0 441 aa15.05■□□□□ -0
USE1-208ENST00000600970 FARSBQ9NSD9 589 aaKnown RBP15.05■□□□□ -0
USE1-208ENST00000600970 MED11Q9P086 117 aa15.05■□□□□ -0
USE1-208ENST00000600970 UTS2RQ9UKP6 389 aa15.05■□□□□ -0
USE1-208ENST00000600970 LAMP3Q9UQV4 416 aa15.05■□□□□ -0
USE1-208ENST00000600970 LINC01387J3KSC0 135 aa15.04■□□□□ -0
USE1-208ENST00000600970 TLX2O43763 284 aaPredicted RBP15.04■□□□□ -0
USE1-208ENST00000600970 KLHL2O95198 593 aa15.04■□□□□ -0
USE1-208ENST00000600970 TP53P04637 393 aaPredicted RBP15.04■□□□□ -0
USE1-208ENST00000600970 RPS3AP61247 264 aaKnown RBP15.04■□□□□ -0
USE1-208ENST00000600970 CALCOCO2Q13137 446 aa15.04■□□□□ -0
USE1-208ENST00000600970 GANABQ14697 944 aaKnown RBP15.04■□□□□ -0
USE1-208ENST00000600970 TECRLQ5HYJ1 363 aa15.04■□□□□ -0
USE1-208ENST00000600970 MROH9Q5TGP6 573 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms