RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 NKX2-2O95096 273 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 ALOX5P09917 674 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 ELAVL4P26378 380 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 S100A3P33764 101 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 PTGS2P35354 604 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 CLK3P49761 638 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 LRRC74AQ0VAA2 488 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 GSTA3Q16772 222 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC9B1Q4ZJI4 515 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 OR4F3Q6IEY1 312 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 MTFR2Q6P444 385 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 EPGNQ6UW88 154 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 GLB1L3Q8NCI6 653 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 SFXN5Q8TD22 340 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 SLC9A6Q92581 669 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 RELTQ969Z4 430 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 FAM120BQ96EK7 910 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 TMEM41AQ96HV5 264 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 NODALQ96S42 347 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 OSBPL11Q9BXB4 747 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 LDAHQ9H6V9 325 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 ZNF446Q9NWS9 450 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 ZNF835Q9Y2P0 537 aa15.84■□□□□ 0.13
SHKBP1-212ENST00000596163 ESPL1Q14674 2120 aa15.83■□□□□ 0.13
SHKBP1-212ENST00000596163 A0A1B0GTH9 108 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 ANKRD28O15084 1053 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 UBDO15205 165 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 ATP8B1O43520 1251 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 HCN1O60741 890 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 ICOSLGO75144 302 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 SEMA7AO75326 666 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 PDE9AO76083 593 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 IL33O95760 270 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 IGHG3P01860 377 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 ALDOCP09972 364 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 MAGEA5P43359 124 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 TP53BP2Q13625 1128 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 MFSD12Q6NUT3 480 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 Q6ZPB1 254 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 OR4N2Q8NGD1 307 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 OR1J4Q8NGS1 313 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 SSC4DQ8WTU2 575 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 HOXB13Q92826 284 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 EFHD2Q96C19 240 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 EXO5Q9H790 373 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 CXorf36Q9H7Y0 433 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 HHATLQ9HCP6 504 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 ACKR4Q9NPB9 350 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 SLCO1B3Q9NPD5 702 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 SDHAF3Q9NRP4 125 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 PLSCR2Q9NRY7 297 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 SIRT3Q9NTG7 399 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 SUCOQ9UBS9 1254 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 FAF1Q9UNN5 650 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 PCDHGB3Q9Y5G1 929 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 GPR45Q9Y5Y3 372 aa15.83■□□□□ 0.12
SHKBP1-212ENST00000596163 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 E9PBE3 544 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 ZNF195O14628 629 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 SUSD5O60279 629 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 WISP2O76076 250 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 HMGN2P05204 90 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 GDF1P27539 372 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 MAP3K8P41279 467 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 CA7P43166 264 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 MAN2A2P49641 1150 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 NME5P56597 212 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 UFM1P61960 85 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 SRSF1Q07955 248 aaKnown RBP eCLIP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 PDCD4Q53EL6 469 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 C1QL3Q5VWW1 255 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 BICRALQ6AI39 1079 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 TIGD3Q6B0B8 471 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 TRILQ7L0X0 811 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 WDR53Q7Z5U6 358 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 ADAMTS15Q8TE58 950 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 NUDT8Q8WV74 236 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 JADE3Q92613 823 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 GIMAP5Q96F15 307 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 CHMP6Q96FZ7 201 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 STACQ99469 402 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 ACTRT3Q9BYD9 372 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 ZNF703Q9H7S9 590 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 MED4Q9NPJ6 270 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 FAM120CQ9NX05 1096 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 GIN1Q9NXP7 522 aa15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 ERRFI1Q9UJM3 462 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-212ENST00000596163 TRGV5A0A0B4J1U4 118 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 A0A1B0GVC2 190 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 OR14I1A6ND48 311 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 LRRC3CA6NJW4 275 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 CCL21O00585 134 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 SLC22A3O75751 556 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 CBR3O75828 277 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 CPSF4O95639 269 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 ESRRAP11474 423 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 CYP4B1P13584 511 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 LCN1P31025 176 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 SOAT1P35610 550 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms