RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 BAG2O95816 211 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 SERPINA1P01009 418 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 BCHEP06276 602 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 GPIP06744 558 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 C8BP07358 591 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ACP2P11117 423 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 AQP1P29972 269 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 EMDP50402 254 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 CLCN2P51788 898 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 CRISP3P54108 245 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 NFATC3Q12968 1075 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 SYPL1Q16563 259 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 LRRC23Q53EV4 343 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 TMEM205Q6UW68 189 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 RNF111Q6ZNA4 994 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 CCDC80Q76M96 950 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 WDR53Q7Z5U6 358 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 PATL1Q86TB9 770 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF615Q8N8J6 731 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ENDOVQ8N8Q3 282 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ANKFN1Q8N957 763 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC16A11Q8NCK7 471 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF248Q8NDW4 579 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC2A12Q8TD20 617 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF721Q8TF20 911 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 CT55Q8WUE5 264 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 PYDC1Q8WXC3 89 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 CDS1Q92903 461 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 TMEM19Q96HH6 336 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF607Q96SK3 696 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 LPAR4Q99677 370 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 LMF2Q9BU23 707 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 EFHD1Q9BUP0 239 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 NUDT9Q9BW91 350 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 FAM117AQ9C073 453 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 DCLRE1BQ9H816 532 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 DCAF13Q9NV06 445 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ADPRHL2Q9NX46 363 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 CALML5Q9NZT1 146 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 COPS7AQ9UBW8 275 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ANAPC2Q9UJX6 822 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 SAMD4AQ9UPU9 718 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 AURKCQ9UQB9 309 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF451Q9Y4E5 1061 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 KCNE3Q9Y6H6 103 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 IGHV3-20A0A0C4DH32 117 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 A0A0G2JPF8 293 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 TCRBV5S2A0A599 114 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 DHRS12A0PJE2 317 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 A8MVJ9 347 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 HNRNPCL2B2RXH8 293 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 HNRNPCL3B7ZW38 293 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 H0Y3Z8 333 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 PCDH17O14917 1159 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 SERPINB7O75635 380 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 NKX2-2O95096 273 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 PGM3O95394 542 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF682O95780 498 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 DDAH2O95865 285 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 AK1P00568 194 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 HNRNPCL4P0DMR1 293 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 PSMA4P25789 261 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 CD82P27701 267 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC7A1P30825 629 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 POU6F2P78424 691 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 HPCAP84074 193 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 DUSP8Q13202 625 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 DUSP5Q16690 384 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 GLIPR1L2Q4G1C9 344 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 FAM98BQ52LJ0 330 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 FBXW10Q5XX13 1052 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 HLA-DQA1Q5Y7H0 255 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 PAPD4Q6PIY7 484 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 CBLL1Q75N03 491 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 KRT73Q86Y46 540 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 COX18Q8N8Q8 333 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 OR1N1Q8NGS0 311 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 OR2Y1Q8NGV0 311 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 C16orf52Q8NHV5 167 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 CANT1Q8WVQ1 401 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 DUS3LQ96G46 650 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 PYURFQ96I23 114 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 TRNT1Q96Q11 434 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 SEPHS2Q99611 448 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 SPATA5L1Q9BVQ7 753 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 RASSF4Q9H2L5 321 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 DUSP22Q9NRW4 184 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 CCM2LQ9NUG4 571 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 OLAHQ9NV23 265 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 AP4S1Q9Y587 144 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 V9GYQ6 96 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 FER1L5A0AVI2 2057 aa12.12□□□□□ -0.47
SHKBP1-209ENST00000595803 AHCTF1Q8WYP5 2266 aa12.11□□□□□ -0.47
SHKBP1-209ENST00000595803 C2orf92A0A1B0GVN3 265 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms