RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZNF385CQ66K41 422 aaPredicted RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 PRSS58Q8IYP2 241 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 SLC16A11Q8NCK7 471 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 RNF217Q8TC41 542 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 RIT1Q92963 219 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 TSLPQ969D9 159 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 PMEPA1Q969W9 287 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 LIN28AQ9H9Z2 209 aaKnown RBP12.32□□□□□ -0.44
VRK3-205ENST00000593919 EXD2Q9NVH0 621 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 PCDHGA8Q9Y5G5 932 aa12.32□□□□□ -0.44
VRK3-205ENST00000593919 IGKV3D-11A0A0A0MRZ8 115 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 LOC100130705A0A1B0GUX0 176 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 C5orf58C9J3I9 102 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 HRKO00198 91 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 CBX7O95931 251 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 RECKO95980 971 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 OPN1SWP03999 348 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 IFNA16P05015 189 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 HBQ1P09105 142 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 IFI6P09912 130 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 POLR2IP36954 125 aaKnown RBP12.31□□□□□ -0.44
VRK3-205ENST00000593919 ARHGDIAP52565 204 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 MC2RQ01718 297 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 RHAGQ02094 409 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 FUT5Q11128 374 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 MAP4K2Q12851 820 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 DYNC1I2Q13409 638 aaKnown RBP12.31□□□□□ -0.44
VRK3-205ENST00000593919 CTU2Q2VPK5 515 aaKnown RBP12.31□□□□□ -0.44
VRK3-205ENST00000593919 CDC73Q6P1J9 531 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 CCDC80Q76M96 950 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 LAPTM4BQ86VI4 370 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 SLC30A8Q8IWU4 369 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 CMKLR1Q99788 373 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 RIBC2Q9H4K1 309 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 RUBCNLQ9H714 662 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 FBXO8Q9NRD0 319 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 ADPRHL2Q9NX46 363 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 KCNE3Q9Y6H6 103 aa12.31□□□□□ -0.44
VRK3-205ENST00000593919 TMEM247A6NEH6 219 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 M0QX08 132 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 BCKDKO14874 412 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 SUV39H1O43463 412 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 ASNA1O43681 348 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 SLC28A2O43868 658 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 CPNE3O75131 537 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 CYP4B1P13584 511 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 ZNF28P17035 718 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 ITIH1P19827 911 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 S1PR1P21453 382 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 DNAJA1P31689 397 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 RORAP35398 523 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 DAPP51397 102 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 MAPK10P53779 464 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 FOXL2P58012 376 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 DCDP81605 110 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 E2F1Q01094 437 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 RAB39AQ14964 217 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 RFX4Q33E94 735 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 CRB2Q5IJ48 1285 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 RBM48Q5RL73 367 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 STPG1Q5TH74 334 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 PIP4P1Q86T03 277 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 CHDHQ8NE62 594 aaPredicted RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 SLC9A6Q92581 669 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 TAMM41Q96BW9 452 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 TREX2Q9BQ50 279 aaPredicted RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 VN1R1Q9GZP7 353 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 GABARAPL1Q9H0R8 117 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 IRF2BPLQ9H1B7 796 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 PDP1Q9P0J1 537 aaPredicted RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 MKL2Q9ULH7 1088 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 SAMHD1Q9Y3Z3 626 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 IGLV3-12A0A075B6K2 115 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 TMEM229AB2RXF0 380 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 NR2F1P10589 423 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 FPR1P21462 350 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 AGXTP21549 392 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 SSTR4P31391 388 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 PGDP52209 483 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 KCNJ10P78508 379 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 CD47Q08722 323 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 DUSP8Q13202 625 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 BIKQ13323 160 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 SHISA6Q6ZSJ9 500 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 OLIG3Q7RTU3 272 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 CYP4Z1Q86W10 505 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 OR52R1Q8NGF1 315 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 STT3BQ8TCJ2 826 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 ADAMTS15Q8TE58 950 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 SGCDQ92629 289 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 HDAC2Q92769 488 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 PMM1Q92871 262 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 ISOC1Q96CN7 298 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 SLC35A4Q96G79 324 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms