RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CEBPEQ15744 281 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 PRICKLE4Q2TBC4 344 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 AGKQ53H12 422 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 COLEC12Q5KU26 742 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 DHFR2Q86XF0 187 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 DOK1Q99704 481 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 TRIM15Q9C019 465 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 BRINP2Q9C0B6 783 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 REEP4Q9H6H4 257 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 COL6A6A6NMZ7 2263 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 CPAMD8Q8IZJ3 1885 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 SPTA1P02549 2419 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 OR5H15A6NDH6 313 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 TMEM200CA6NKL6 621 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 PLEKHN1Q494U1 663 aaPredicted RBP18.17■□□□□ 0.5
LSM4-203ENST00000593829 VWA5B2Q8N398 1253 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 ZNF764Q96H86 408 aaPredicted RBP18.17■□□□□ 0.5
LSM4-203ENST00000593829 CIB1Q99828 191 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 UTP23Q9BRU9 249 aaKnown RBP18.17■□□□□ 0.5
LSM4-203ENST00000593829 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.17■□□□□ 0.5
LSM4-203ENST00000593829 RHBDL2Q9NX52 303 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 MAT2BQ9NZL9 334 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 MYOTQ9UBF9 498 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 TRIM64BA6NI03 449 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 MYO1GB0I1T2 1018 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 SSTR4P31391 388 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 CASRP41180 1078 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 TNFSF10P50591 281 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 SLC37A1P57057 533 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 MGAT2Q10469 447 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 TUBA3CQ13748 450 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 PRSS53Q2L4Q9 553 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 TUBA3EQ6PEY2 450 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 C9orf40Q8IXQ3 194 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 SMYD1Q8NB12 490 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 OR7G1Q8NGA0 311 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 NUBPLQ8TB37 319 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 PPCDCQ96CD2 204 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 MTERF3Q96E29 417 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 HOPXQ9BPY8 73 aaPredicted RBP18.16■□□□□ 0.5
LSM4-203ENST00000593829 GPATCH1Q9BRR8 931 aaKnown RBP18.16■□□□□ 0.5
LSM4-203ENST00000593829 LIN28AQ9H9Z2 209 aaKnown RBP18.16■□□□□ 0.5
LSM4-203ENST00000593829 SLAMF7Q9NQ25 335 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 ASIC5Q9NY37 505 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 ABCD2Q9UBJ2 740 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 FAF1Q9UNN5 650 aaPredicted RBP18.16■□□□□ 0.5
LSM4-203ENST00000593829 YARS2Q9Y2Z4 477 aaKnown RBP18.16■□□□□ 0.5
LSM4-203ENST00000593829 CFAP46Q8IYW2 2715 aa18.16■□□□□ 0.5
LSM4-203ENST00000593829 OR6C76A6NM76 312 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 TBX19O60806 448 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 ITGA10O75578 1167 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 CLPSP04118 112 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 NTSP30990 170 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 PTGER1P34995 402 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 CD96P40200 585 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 PTGR1Q14914 329 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 ZNF169Q14929 603 aaPredicted RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 FAM111BQ6SJ93 734 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 LARP4Q71RC2 724 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■■□□ 15.8
LSM4-203ENST00000593829 SLC29A4Q7RTT9 530 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 R3HCC1LQ7Z5L2 792 aaKnown RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 PCYOX1LQ8NBM8 494 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 ZNF675Q8TD23 568 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 ISOC1Q96CN7 298 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 ANKRD10Q9NXR5 420 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 SH3BP4Q9P0V3 963 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 LUZP4Q9P127 313 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 TRAV17A0A0B4J275 112 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 WWP2O00308 870 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 OR2J2O76002 312 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 DDX5P17844 614 aaKnown RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 LBPP18428 481 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 S1PR1P21453 382 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 TRHRP34981 398 aaPredicted RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 HPCAL1P37235 193 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 RPL3P39023 403 aaKnown RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 ST13P50502 369 aaKnown RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 OC90Q02509 493 aaPredicted RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 BNIP2Q12982 314 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 TMED1Q13445 227 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 PDE7AQ13946 482 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 LTB4RQ15722 352 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 PRICKLE2Q7Z3G6 844 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 FAM9CQ8IZT9 166 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 OR9A2Q8NGT5 310 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 SUN3Q8TAQ9 357 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 CTHRC1Q96CG8 243 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 YTHDF1Q9BYJ9 559 aaKnown RBP18.15■□□□□ 0.5
LSM4-203ENST00000593829 OR10A5Q9H207 317 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 ZNF639Q9UID6 485 aa18.15■□□□□ 0.5
LSM4-203ENST00000593829 hCG_2014768A0A024R1R8 64 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 PLOD2O00469 737 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 DLGAP1O14490 977 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 G6PDP11413 515 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 HSD17B1P14061 328 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 CYB561P49447 251 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 SSR4P51571 173 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 NCBP2P52298 156 aaKnown RBP eCLIP18.14■□□□□ 0.494e-7■□□□□ 8.2
LSM4-203ENST00000593829 ZNF628Q5EBL2 1059 aa18.14■□□□□ 0.49
LSM4-203ENST00000593829 LCN8Q6JVE9 175 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms