RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 WIPI1Q5MNZ9 446 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-239ENST00000592467 SH2D4BQ5SQS7 431 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 VASNQ6EMK4 673 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 LIX1LQ8IVB5 337 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 FAM83FQ8NEG4 500 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-239ENST00000592467 CIDECQ96AQ7 238 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-239ENST00000592467 TSSK3Q96PN8 268 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 SPOCK3Q9BQ16 436 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 PRDM14Q9GZV8 571 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 REEP4Q9H6H4 257 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 EML4Q9HC35 981 aaKnown RBP18.39■□□□□ 0.53
CIRBP-239ENST00000592467 SENP1Q9P0U3 644 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 TMED5Q9Y3A6 229 aa18.39■□□□□ 0.53
CIRBP-239ENST00000592467 TACC2O95359 2948 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 C17orf51A8MQB3 221 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 TRAPPC6AO75865 159 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 CHEK2O96017 543 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 HOXD4P09016 255 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-239ENST00000592467 BMP7P18075 431 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 LARP4Q71RC2 724 aaKnown RBP eCLIP18.38■□□□□ 0.53
CIRBP-239ENST00000592467 WDR53Q7Z5U6 358 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-239ENST00000592467 HOMEZQ8IX15 550 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 DDIASQ8IXT1 998 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 LIX1Q8N485 282 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 CLHC1Q8NHS4 586 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 AGR3Q8TD06 166 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 EFHD2Q96C19 240 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-239ENST00000592467 TMCO6Q96DC7 493 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 LMF2Q9BU23 707 aaKnown RBP18.38■□□□□ 0.53
CIRBP-239ENST00000592467 UGT2B28Q9BY64 529 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 OR2B2Q9GZK3 357 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 SSU72Q9NP77 194 aaKnown RBP18.38■□□□□ 0.53
CIRBP-239ENST00000592467 SERHLQ9NQF3 203 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 KLRF1Q9NZS2 232 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 MAPRE3Q9UPY8 281 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 WIF1Q9Y5W5 379 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 PCNX3Q9H6A9 2034 aa18.38■□□□□ 0.53
CIRBP-239ENST00000592467 C15orf38-AP3S2A0A0A6YYH1 394 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 PDPK1O15530 556 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 AKAP10O43572 662 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 DHRS4L1P0CG22 281 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 CYP4B1P13584 511 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 ZNF155Q12901 538 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-239ENST00000592467 GAB1Q13480 694 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 EFR3AQ14156 821 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 MPP2Q14168 576 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 GALNTL6Q49A17 601 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 ACSF3Q4G176 576 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-239ENST00000592467 RIPPLY2Q5TAB7 128 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 YRDCQ86U90 279 aaKnown RBP18.37■□□□□ 0.53
CIRBP-239ENST00000592467 WDYHV1Q96HA8 205 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 PKNOX2Q96KN3 472 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 ZIM3Q96PE6 472 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 RTN4RQ9BZR6 473 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 ZNF395Q9H8N7 513 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-239ENST00000592467 DDX18Q9NVP1 670 aaKnown RBP18.37■□□□□ 0.53
CIRBP-239ENST00000592467 FLRT3Q9NZU0 649 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 NTMQ9P121 344 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 FBXL2Q9UKC9 423 aa18.37■□□□□ 0.53
CIRBP-239ENST00000592467 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 FAM90A27PA6NNH2 459 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 AHRRA9YTQ3 701 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 ITM2AO43736 263 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 FADS1O60427 444 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 CBR3O75828 277 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 MSX1P28360 303 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 SERPINB4P48594 390 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 HSPB3Q12988 150 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 CYP27C1Q4G0S4 372 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 PLCZ1Q86YW0 608 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 INTS1Q8N201 2190 aaKnown RBP18.36■□□□□ 0.53
CIRBP-239ENST00000592467 NAXEQ8NCW5 288 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 PPCDCQ96CD2 204 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 GIMAP5Q96F15 307 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 C20orf27Q9GZN8 174 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 ALKBH4Q9NXW9 302 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 ATP6V1HQ9UI12 483 aa18.36■□□□□ 0.53
CIRBP-239ENST00000592467 RGS16O15492 202 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-239ENST00000592467 CTIFO43310 598 aaKnown RBP18.35■□□□□ 0.53
CIRBP-239ENST00000592467 PEX11AO75192 247 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 LYPLA1O75608 230 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-239ENST00000592467 EPPINO95925 133 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 IL12BP29460 328 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 ZFP36L2P47974 494 aaKnown RBP18.35■□□□□ 0.53
CIRBP-239ENST00000592467 GFRA1P56159 465 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 WNT3P56703 355 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 EXOSC6Q5RKV6 272 aaKnown RBP18.35■□□□□ 0.53
CIRBP-239ENST00000592467 C6orf136Q5SQH8 315 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 POMZP3Q6PJE2 187 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 NUDT8Q8WV74 236 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 MTERF3Q96E29 417 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 PPP3R2Q96LZ3 170 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 RUBCNLQ9H714 662 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 ACSS1Q9NUB1 689 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-239ENST00000592467 CBLCQ9ULV8 474 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 OR10H1Q9Y4A9 318 aa18.35■□□□□ 0.53
CIRBP-239ENST00000592467 DOCK7Q96N67 2140 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 AKAP9Q99996 3911 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 GXYLT2A0PJZ3 443 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 IL33O95760 270 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms