RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 KLHDC8BQ8IXV7 354 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 SMARCD2Q92925 531 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 SNX11Q9Y5W9 270 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 UBXN7O94888 489 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 IFNA6P05013 189 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 MAZP56270 477 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 CRYZQ08257 329 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 PUM1Q14671 1186 aaKnown RBP eCLIP16.15■□□□□ 0.181e-7■□□□□ 10.5
SMARCA4-215ENST00000590574 C4orf46Q504U0 113 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF527Q8NB42 609 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 THEM6Q8WUY1 208 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 DDX31Q9H8H2 851 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ELL3Q9HB65 397 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 TEX10Q9NXF1 929 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 TRAPPC13A5PLN9 417 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 CDC123O75794 336 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ECDO95905 644 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 HTR1AP08908 422 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 TYRP1P17643 537 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ILKQ13418 452 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 HENMT1Q5T8I9 393 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 CALHM3Q86XJ0 350 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 OR4F15Q8NGB8 312 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 WDR20Q8TBZ3 569 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 DEDD2Q8WXF8 326 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 DBIP07108 87 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 ANXA3P12429 323 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 LCN1P31025 176 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 SLC6A11P48066 632 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 BCL2L15Q5TBC7 163 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 HMGB4Q8WW32 186 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 MCCC1Q96RQ3 725 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 UPB1Q9UBR1 384 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 BRWD3Q6RI45 1802 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 ANTXRLA6NF34 631 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 WASH3PC4AMC7 463 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 TSPAN4O14817 238 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 TSPAN9O75954 239 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 NCR1O76036 304 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 XCR1P46094 333 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 RPS25P62851 125 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF267Q14586 743 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 LACC1Q8IV20 430 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 OR2L5Q8NG80 312 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 QRSL1Q9H0R6 528 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 KLHL31Q9H511 634 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 TAS2R10Q9NYW0 307 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 CLEC3AO75596 197 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 CD2P06729 351 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 GNALP38405 381 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 MMP12P39900 470 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 MAP3K8P41279 467 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 DUSP7Q16829 419 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 ARMCX6Q7L4S7 300 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 TMIEQ8NEW7 156 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 MS4A4EQ96PG1 132 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 ACER3Q9NUN7 267 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 HRASLS2Q9NWW9 162 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 CFL1P23528 166 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 SOX2P48431 317 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 ZCCHC12Q6PEW1 402 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 KLHL24Q6TFL4 600 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 BTLAQ7Z6A9 289 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 MMP21Q8N119 569 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 PHOSPHO1Q8TCT1 267 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 OR7D2Q96RA2 312 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 DOK1Q99704 481 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 SLA2Q9H6Q3 261 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 RANBP3Q9H6Z4 567 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 ACSS1Q9NUB1 689 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 MRPL15Q9P015 296 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 OSGIN1Q9UJX0 560 aa16.14■□□□□ 0.17
SMARCA4-215ENST00000590574 TRBV2A0A0J9YWF9 115 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 EMP3P54852 163 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 INAVAQ3KP66 663 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 TCEAL5Q5H9L2 206 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 TM4SF18Q96CE8 201 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 NEURL3Q96EH8 262 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 A4GALTQ9NPC4 353 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 DNMT3BQ9UBC3 853 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 PCDHGA4Q9Y5G9 962 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 ETHE1O95571 254 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF888P0CJ79 500 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 GIMD1P0DJR0 217 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 CXCR1P25024 350 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 GRPRP30550 384 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 NNATQ16517 81 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 PEG10Q86TG7 708 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 OR52E2Q8NGJ4 325 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 OR5W2Q8NH69 310 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 OR5K2Q8NHB8 316 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 RPLP0P6Q8NHW5 317 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 TRMT10AQ8TBZ6 339 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 CDS1Q92903 461 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 PMEPA1Q969W9 287 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF582Q96NG8 517 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 SLC28A3Q9HAS3 691 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 FOLH1BQ9HBA9 442 aa16.13■□□□□ 0.17
SMARCA4-215ENST00000590574 SCDO00767 359 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms