RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TIFABQ6ZNK6 161 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 BTLAQ7Z6A9 289 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 PLCZ1Q86YW0 608 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 C1orf52Q8N6N3 182 aaKnown RBP10.52□□□□□ -0.73
LIG3-207ENST00000586119 OR5M1Q8NGP8 315 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 ISL2Q96A47 359 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 KLHL29Q96CT2 875 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 STARD4Q96DR4 205 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 UCN2Q96RP3 112 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 MDFIQ99750 246 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 TM9SF2Q99805 663 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 SFXN3Q9BWM7 321 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 RTN4RQ9BZR6 473 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 OPN3Q9H1Y3 402 aaPredicted RBP10.52□□□□□ -0.73
LIG3-207ENST00000586119 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
LIG3-207ENST00000586119 AHSPQ9NZD4 102 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 FLRT3Q9NZU0 649 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 GPR55Q9Y2T6 319 aaPredicted RBP10.52□□□□□ -0.73
LIG3-207ENST00000586119 JMJD1CQ15652 2540 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
LIG3-207ENST00000586119 ANK3Q12955 4377 aaKnown RBP10.51□□□□□ -0.73
LIG3-207ENST00000586119 CCDC189A1A4V9 331 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 H7C1Q1 480 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 TO15178 435 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 TSPAN2O60636 221 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 SMNDC1O75940 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
LIG3-207ENST00000586119 OR4F21O95013 312 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 SHBGP04278 402 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 CT45A8P0DMV1 189 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 CT45A9P0DMV2 189 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 ZNF708P17019 499 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 PCSK6P29122 969 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 SUCLG1P53597 346 aaKnown RBP10.51□□□□□ -0.73
LIG3-207ENST00000586119 RAE1P78406 368 aaKnown RBP10.51□□□□□ -0.73
LIG3-207ENST00000586119 SNTA1Q13424 505 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 CT45A2Q5DJT8 189 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 ZNF628Q5EBL2 1059 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 Q5PR19 223 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 SHEQ5VZ18 495 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 ANKRD34AQ69YU3 496 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 KLC3Q6P597 504 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 ENPP6Q6UWR7 440 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 LRIG3Q6UXM1 1119 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 PAGE2Q7Z2X7 111 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 ZNF550Q7Z398 422 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 IFNEQ86WN2 208 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 GRAMD2AQ8IUY3 354 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 UBQLNLQ8IYU4 475 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 TMEM151AQ8N4L1 468 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 OR9A2Q8NGT5 310 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 TRPC4APQ8TEL6 797 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 SELENOMQ8WWX9 145 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 FIG4Q92562 907 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 EFHD2Q96C19 240 aaPredicted RBP10.51□□□□□ -0.73
LIG3-207ENST00000586119 PIK3IP1Q96FE7 263 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 Q96MF0 132 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 SFXN2Q96NB2 322 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 COL21A1Q96P44 957 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 ELOVL6Q9H5J4 265 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 XPR1Q9UBH6 696 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 UTS2RQ9UKP6 389 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 CFL2Q9Y281 166 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 TESMINQ9Y4I5 508 aa10.51□□□□□ -0.73
LIG3-207ENST00000586119 NSD1Q96L73 2696 aaPredicted RBP10.51□□□□□ -0.73
LIG3-207ENST00000586119 RAI1Q7Z5J4 1906 aaPredicted RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 TLN2Q9Y4G6 2542 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 TRIM64A6NGJ6 449 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 FRG2CA6NGY1 282 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 TRIM64BA6NI03 449 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 GOLGA6L10A6NI86 522 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 OR6C70A6NIJ9 312 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 TRIM49D1C9J1S8 452 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 STX16-NPEPL1H3BU86 382 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 STX16O14662 325 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 ACOX3O15254 700 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 HCRTR2O43614 444 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 HEXAP06865 529 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 H2AFXP16104 143 aaPredicted RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 GRK2P25098 689 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 LOXP28300 417 aaPredicted RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 SRD5A2P31213 254 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 MAGEA12P43365 314 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 KIR2DL2P43627 348 aaPredicted RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 SIRPAP78324 504 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 P4HA3Q7Z4N8 544 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 LCA5Q86VQ0 697 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 P3H2Q8IVL5 708 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 CNEP1R1Q8N9A8 125 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 ZNF610Q8N9Z0 462 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 ACMSDQ8TDX5 336 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 ZNF483Q8TF39 744 aaPredicted RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 SMPDL3BQ92485 455 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 EXOSC8Q96B26 276 aaKnown RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 PGM2Q96G03 612 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 SLC35A4Q96G79 324 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 ZC3HAV1LQ96H79 300 aaKnown RBP10.5□□□□□ -0.73
LIG3-207ENST00000586119 PIGMQ9H3S5 423 aa10.5□□□□□ -0.73
LIG3-207ENST00000586119 DSN1Q9H410 356 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms