RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 FOXL1Q12952 345 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 OASLQ15646 514 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 ZSWIM7Q19AV6 140 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 GALNT10Q86SR1 603 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 NUP43Q8NFH3 380 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 OR10D3Q8NH80 312 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 ADOQ96SZ5 270 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 C1QTNF6Q9BXI9 259 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 HDHD5Q9BXW7 423 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 ROGDIQ9GZN7 287 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 ASIC3Q9UHC3 531 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 BCAP29Q9UHQ4 241 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 FBXO5Q9UKT4 447 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 USP22Q9UPT9 525 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 FKBP7Q9Y680 259 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 ATP23Q9Y6H3 246 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 LOC105371242A0A075B767 164 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 A0A1W2PR48 441 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 NCF1BA6NI72 391 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 NCF1CA8MVU1 366 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 PGRMC2O15173 223 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 LILRA1O75019 489 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 TUBBP07437 444 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 NUDT17P0C025 328 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 HKR1P10072 659 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 PCNAP12004 261 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 NCF1P14598 390 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 NT5EP21589 574 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 CETN2P41208 172 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 DVL1P1P54792 670 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 GAS1P54826 345 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 MAP4K2Q12851 820 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 ACAP2Q15057 778 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 PPP1R3AQ16821 1122 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 FAM111BQ6SJ93 734 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 LUZP1Q86V48 1076 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 RELL1Q8IUW5 271 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 GPATCH11Q8N954 259 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 CCDC89Q8N998 374 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 OR2M3Q8NG83 312 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 OR52B6Q8NGF0 335 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 ABHD3Q8WU67 409 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 ESAMQ96AP7 390 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 COL21A1Q96P44 957 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 VRK1Q99986 396 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 PELOQ9BRX2 385 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 TMEM185BQ9H7F4 350 aa12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 C20orf96Q9NUD7 363 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-213ENST00000580446 SDR42E2A6NKP2 422 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 SCELO95171 688 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 SLC35E2P0CK97 266 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 NAGAP17050 411 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 S1PR1P21453 382 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 EDNRAP25101 427 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 MAGEA1P43355 309 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 CHN2P52757 468 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 IL2P60568 153 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 PHC1P78364 1004 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 CHRNEQ04844 493 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 OR4C11Q6IEV9 310 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 NPAS1Q99742 590 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 RTN4RQ9BZR6 473 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 NAT10Q9H0A0 1025 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 CDC42EP4Q9H3Q1 356 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 NARFLQ9H6Q4 476 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 NT5DC2Q9H857 520 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 SMYD2Q9NRG4 433 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 IARS2Q9NSE4 1012 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 HIF1ANQ9NWT6 349 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 TAS2R13Q9NYV9 303 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 IFNKQ9P0W0 207 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 PPP4R1LQ9P1A2 415 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 PRSS50Q9UI38 385 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 PMF1-BGLAPU3KQ54 211 aa12.37□□□□□ -0.43
CSNK1D-213ENST00000580446 TENM3Q9P273 2699 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 BIRC6Q9NR09 4857 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 ZCWPW2A0A1B0GU75 182 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 CCT8L1PA6NM43 557 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 ZNF814B7Z6K7 855 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 M0R1B8 84 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 TNFSF11O14788 317 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 TMPRSS11DO60235 418 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 NR2F6P10588 404 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 GABRB3P28472 473 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 TLX1P31314 330 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 STIP1P31948 543 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 HPDP32754 393 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 CHRNB3Q05901 458 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 DDX39BQ13838 428 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 MST1LQ2TV78 715 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 HSP90AA5PQ58FG0 334 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 C1orf229Q6ZS94 237 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 USP43Q70EL4 1123 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 GLCCI1Q86VQ1 547 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 TUSC5Q8IXB3 177 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms