RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SCN8AQ9UQD0 1980 aa13.56□□□□□ -0.24
SMG6-215ENST00000574501 MYADML2A6NDP7 307 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 AGAP14A8MT82 685 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 SEPT4O43236 478 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 SGTAO43765 313 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 EFCAB14O75071 495 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 FZD7O75084 574 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 STC2O76061 302 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 URODP06132 367 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 IL3P08700 152 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 ZDHHC11BP0C7U3 371 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 MPC1LP0DKB6 136 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 HOXC8P31273 242 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 THBS2P35442 1172 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 THPOP40225 353 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 CSKP41240 450 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 ALKAL2Q6UX46 152 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 RSPO2Q6UXX9 243 aaPredicted RBP13.55□□□□□ -0.24
SMG6-215ENST00000574501 UBE2Q1Q7Z7E8 422 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 KLHL36Q8N4N3 616 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 BBS1Q8NFJ9 593 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 RPLP0P6Q8NHW5 317 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 PIGKQ92643 395 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 YIPF5Q969M3 257 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 FOPNLQ96NB1 174 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 ZNF416Q9BWM5 594 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 SMG9Q9H0W8 520 aaKnown RBP13.55□□□□□ -0.24
SMG6-215ENST00000574501 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
SMG6-215ENST00000574501 MRPL15Q9P015 296 aaKnown RBP13.55□□□□□ -0.24
SMG6-215ENST00000574501 FBXL2Q9UKC9 423 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 SIRT4Q9Y6E7 314 aaPredicted RBP13.55□□□□□ -0.24
SMG6-215ENST00000574501 IRGMA1A4Y4 181 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 OR2AG2A6NM03 316 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 COCHO43405 550 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 VNN2O95498 520 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 SLC16A8O95907 504 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 NPR2P20594 1047 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 KCNJ5P48544 419 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 AP1S1P61966 158 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 SP140Q13342 867 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 PDE7AQ13946 482 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 FAM71E1Q6IPT2 247 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 SLC27A4Q6P1M0 643 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 Q6ZTK2 550 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 ESPNLQ6ZVH7 1005 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 CHST9Q7L1S5 443 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 LILRA3Q8N6C8 439 aaPredicted RBP13.55□□□□□ -0.24
SMG6-215ENST00000574501 TRMT10AQ8TBZ6 339 aaKnown RBP13.55□□□□□ -0.24
SMG6-215ENST00000574501 TEX47Q8TBZ9 253 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 MAN2C1Q9NTJ4 1040 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 CNIH4Q9P003 139 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 TAAR2Q9P1P5 351 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 CBLCQ9ULV8 474 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 COPS3Q9UNS2 423 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 ZNF175Q9Y473 711 aa13.55□□□□□ -0.24
SMG6-215ENST00000574501 RNF13O43567 381 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 GATBO75879 557 aaKnown RBP13.54□□□□□ -0.24
SMG6-215ENST00000574501 RGS9O75916 674 aaPredicted RBP13.54□□□□□ -0.24
SMG6-215ENST00000574501 WNT1P04628 370 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 NMBP08949 121 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 ATP1B2P14415 290 aaPredicted RBP13.54□□□□□ -0.24
SMG6-215ENST00000574501 UQCRC2P22695 453 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 PTSQ03393 145 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 ADGRF1Q5T601 910 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 MED27Q6P2C8 311 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 OVCH2Q7RTZ1 564 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 ZNF649Q9BS31 505 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 TMEM168Q9H0V1 697 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 MIEF1Q9NQG6 463 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 PCDHB16Q9NRJ7 776 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 CFAP97Q9P2B7 532 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 KLHL42Q9P2K6 505 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 IL20RAQ9UHF4 553 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 ACAD8Q9UKU7 415 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SH2B3Q9UQQ2 575 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 A0A0B4J203 849 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SLC9B1P1A6NJY1 282 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SLC38A8A6NNN8 435 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 KRBOX1C9JBD0 128 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SLC16A5O15375 505 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 CHST10O43529 356 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 TFP02787 698 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 ACP5P13686 325 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 CBX5P45973 191 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 PREPP48147 710 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SMIM11AP58511 58 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SIM1P81133 766 aaPredicted RBP13.54□□□□□ -0.24
SMG6-215ENST00000574501 SYPL1Q16563 259 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SLC25A35Q3KQZ1 300 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SFRP4Q6FHJ7 346 aaPredicted RBP13.54□□□□□ -0.24
SMG6-215ENST00000574501 PYHIN1Q6K0P9 492 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 SFXN4Q6P4A7 337 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 PRSS45Q7RTY3 260 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 FGD2Q7Z6J4 655 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 APCDD1Q8J025 514 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 UXS1Q8NBZ7 420 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 WDR89Q96FK6 387 aaPredicted RBP13.54□□□□□ -0.24
SMG6-215ENST00000574501 TBX5Q99593 518 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 KLHL1Q9NR64 748 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 C5AR2Q9P296 337 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms