RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ZWILCHQ9H900 591 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 EXOC1Q9NV70 894 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 P4HTMQ9NXG6 502 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 NFKBIL1Q9UBC1 381 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SEC14L3Q9UDX4 400 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SLC23A2Q9UGH3 650 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 RPL26L1Q9UNX3 145 aaKnown RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 SLC17A4Q9Y2C5 497 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 TMED5Q9Y3A6 229 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 MAGED1Q9Y5V3 778 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF407Q9C0G0 2248 aa4.95□□□□□ -1.62
SF3B3-214ENST00000572365 LOC100509620A0A075B734 347 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 GOLGA8SH3BPF8 625 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 KLF7O75840 302 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 ATP5HO75947 161 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 CH25HO95992 272 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 ANKRD34CP0C6C1 535 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 RPL34P49207 117 aaKnown RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 SERPINB8P50452 374 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF81P51508 661 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 SMSP52788 366 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 PGGT1BP53609 377 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 YWHAEP62258 255 aaKnown RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 SPOCK1Q08629 439 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 MYBPHQ13203 477 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 SLC39A14Q15043 492 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 STK38Q15208 465 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 INAQ16352 499 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 DECR1Q16698 335 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 EFHC1Q5JVL4 640 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 FAM182AQ5T1J6 154 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF324BQ6AW86 544 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 TYW3Q6IPR3 259 aaKnown RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 RPUSD3Q6P087 351 aaKnown RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 C8orf82Q6P1X6 216 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 HPS6Q86YV9 775 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 VSTM4Q8IW00 320 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 BEST3Q8N1M1 668 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 OR1J2Q8NGS2 313 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 CA5BP1Q8WTZ4 195 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 THOC1Q96FV9 657 aaKnown RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 PAGE5Q96GU1 130 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 GRAMD2BQ96HH9 432 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 CELF6Q96J87 481 aaKnown RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF514Q96K75 400 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 C18orf12Q96KH6 178 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 CFAP57Q96MR6 1250 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 DACH2Q96NX9 599 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 RAB3IPQ96QF0 476 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 NUDCD1Q96RS6 583 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 ABHD1Q96SE0 405 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 NPY6RQ99463 290 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 SLC25A33Q9BSK2 321 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 RETREG1Q9H6L5 497 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 ANKZF1Q9H8Y5 726 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 CNOT10Q9H9A5 744 aaKnown RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 SEBOXQ9HB31 216 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.94□□□□□ -1.62
SF3B3-214ENST00000572365 RNF14Q9UBS8 474 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 OR12D3Q9UGF7 316 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 PLAGL1Q9UM63 463 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 MFHAS1Q9Y4C4 1052 aa4.94□□□□□ -1.62
SF3B3-214ENST00000572365 PVALEFA0A1B0GWK0 134 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 TLCD2A6NGC4 264 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 H3BNX3 289 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 SLC19A2O60779 497 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 AVILO75366 819 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 ZWINTO95229 277 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 ATP6V1G2O95670 118 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 SOD1P00441 154 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 F3P13726 295 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 LHCGRP22888 699 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 BDKRB2P30411 391 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 MSH2P43246 934 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 TSFMP43897 325 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 UBE2IP63279 158 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 MYL5Q02045 173 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 DMPKQ09013 629 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 KIF5AQ12840 1032 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 RASA2Q15283 850 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 CAMK4Q16566 473 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 TDRD12Q587J7 1177 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 AGAP7PQ5VUJ5 663 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 KCTD18Q6PI47 426 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 C11orf57Q6ZUT1 292 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 NLRP14Q86W24 1093 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 RAB43Q86YS6 212 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 CHERPQ8IWX8 916 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 IQCF2Q8IXL9 164 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 EMC1Q8N766 993 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 AVL9Q8NBF6 648 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 OR1L3Q8NH93 324 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 NSMCE1Q8WV22 266 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 MAIP1Q8WWC4 291 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 TM9SF4Q92544 642 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 NR4A3Q92570 626 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 RND1Q92730 232 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 AP2M1Q96CW1 435 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF501Q96CX3 271 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms