RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ADIPOR1Q96A54 375 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 NAF1Q96HR8 494 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 LCORQ96JN0 433 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 IP6K3Q96PC2 410 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 TRNT1Q96Q11 434 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 DEFB126Q9BYW3 111 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 NXF5Q9H1B4 397 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 CALML5Q9NZT1 146 aa14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 GPR55Q9Y2T6 319 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-219ENST00000570273 CDC14CA4D256 554 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 PRKNO60260 465 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 ZFAND5O76080 213 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 H6PDO95479 791 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CELA2AP08217 269 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CT45A8P0DMV1 189 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CT45A9P0DMV2 189 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 RFX3P48380 749 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 NR0B1P51843 470 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 MRPS22P82650 360 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 SRSF6Q13247 344 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CCNIQ14094 377 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 ARHGAP11BQ3KRB8 267 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CT45A2Q5DJT8 189 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CCNJQ5T5M9 372 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 FIGNL1Q6PIW4 674 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 GALNT10Q86SR1 603 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 SPPL2CQ8IUH8 684 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CHDHQ8NE62 594 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 OR5L2Q8NGL0 311 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 OR8K3Q8NH51 312 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 NUBPLQ8TB37 319 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 ELP5Q8TE02 316 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 THAP3Q8WTV1 239 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 KCNE4Q8WWG9 221 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 FGF11Q92914 225 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 RSRC1Q96IZ7 334 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 MMP25Q9NPA2 562 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 CBLCQ9ULV8 474 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 ZNF451Q9Y4E5 1061 aa14.27□□□□□ -0.12
HERPUD1-219ENST00000570273 PDE9AO76083 593 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 KCNK2O95069 426 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 PGM3O95394 542 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 DRD5P21918 477 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 KDELR2P33947 212 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 PCBP3P57721 371 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 ACTR3P61158 418 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 MTX3Q5HYI7 312 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 PRAMEF8Q5VWM4 474 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 PRAMEF7Q5VXH5 474 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 LRRC74BQ6ZQY2 392 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 PATL1Q86TB9 770 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 ZNF441Q8N8Z8 693 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 OR4N2Q8NGD1 307 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 TREX2Q9BQ50 279 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 ZNF350Q9GZX5 532 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 RUBCNLQ9H714 662 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 GORASP2Q9H8Y8 452 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 WDR45Q9Y484 360 aa14.26□□□□□ -0.13
HERPUD1-219ENST00000570273 AQP12BA6NM10 295 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 MASP2O00187 686 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ACOX3O15254 700 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 TLX3O43711 291 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 STX11O75558 287 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 SERPINA1P01009 418 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 OPN1SWP03999 348 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ICAM2P13598 275 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ATP6V1C1P21283 382 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 PIGAP37287 484 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ELF3P78545 371 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 CHRNEQ04844 493 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 PLCXD2Q0VAA5 305 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 DECR1Q16698 335 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 CYP27C1Q4G0S4 372 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ATP1A1-AS1Q5TC04 95 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 FRRS1Q6ZNA5 592 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 CCDC80Q76M96 950 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 KRT73Q86Y46 540 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 AQP12AQ8IXF9 295 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 PRR22Q8IZ63 422 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 BCORP1Q8N888 145 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ZSCAN1Q8NBB4 408 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ZNF248Q8NDW4 579 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 C17orf47Q8NEP4 570 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 HSPBAP1Q96EW2 488 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 LMF1Q96S06 567 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 ZNF607Q96SK3 696 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 SDF2Q99470 211 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 SLC38A1Q9H2H9 487 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 LIN28AQ9H9Z2 209 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 CACYBPQ9HB71 228 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 BCL2L10Q9HD36 194 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 POLE3Q9NRF9 147 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 V9GYQ6 96 aa14.25□□□□□ -0.13
HERPUD1-219ENST00000570273 A0A0G2JPF8 293 aa14.24□□□□□ -0.13
HERPUD1-219ENST00000570273 HNRNPCL2B2RXH8 293 aa14.24□□□□□ -0.13
HERPUD1-219ENST00000570273 HNRNPCL3B7ZW38 293 aa14.24□□□□□ -0.13
HERPUD1-219ENST00000570273 WWP2O00308 870 aa14.24□□□□□ -0.13
HERPUD1-219ENST00000570273 TO15178 435 aa14.24□□□□□ -0.13
HERPUD1-219ENST00000570273 GCM2O75603 506 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-219ENST00000570273 ZIC2O95409 532 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms