RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 DCTN3O75935 186 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 ATP5HO75947 161 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CXCL14O95715 111 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 OAS1P00973 400 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 NGFP01138 241 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 VTNP04004 478 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 GSTA2P09210 222 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 ZSCAN5DPP0CG00 497 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 IGHV4-38-2P0DP08 117 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 TROVE2P10155 538 aaKnown RBP eCLIP3.31□□□□□ -1.88
UBR1-211ENST00000569971 NEFHP12036 1026 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 ETS1P14921 441 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 EZRP15311 586 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 ARF4P18085 180 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 UGT1A6P19224 532 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 MIPP30301 263 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 SDC4P31431 198 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 EPHX2P34913 555 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 RPL22P35268 128 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 ACADSBP45954 432 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 RABIFP47224 123 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 NR0B1P51843 470 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 GTF2A1P52655 376 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 NDST1P52848 882 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CDH6P55285 790 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 SLC8A3P57103 927 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 BASP1P80723 227 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 SARNPP82979 210 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 SLC25A11Q02978 314 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 XRCC4Q13426 336 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 TAF13Q15543 124 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 ZKSCAN8Q15776 578 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 EXT1Q16394 746 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 ACKR1Q16570 336 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 GOLGA7BQ2TAP0 167 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 ARMCX4Q5H9R4 360 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 WDR38Q5JTN6 314 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 TOR1AIP1Q5JTV8 583 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CCNYL2Q5T2Q4 361 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 LGSNQ5TDP6 509 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 SCYL2Q6P3W7 929 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 SPSB3Q6PJ21 355 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 RGS9BPQ6ZS82 235 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 C3orf62Q6ZUJ4 267 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 BZW1Q7L1Q6 419 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 CATSPER4Q7RTX7 472 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 NFE4Q86UQ8 179 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 UNC93AQ86WB7 457 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CDR2LQ86X02 465 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 CDKL3Q8IVW4 592 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 THEM5Q8N1Q8 247 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 PRSS35Q8N3Z0 413 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 HDDC3Q8N4P3 179 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 LRRC52Q8N7C0 313 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 JOSD2Q8TAC2 188 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 UBA3Q8TBC4 463 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 SPATA18Q8TC71 538 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 RXFP2Q8WXD0 754 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 GGHQ92820 318 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 NXPE2Q96DL1 559 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 LGALS12Q96DT0 336 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CPB2Q96IY4 423 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 C4orf45Q96LM5 186 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 ZNF354BQ96LW1 612 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 BTBD9Q96Q07 612 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CPXM1Q96SM3 734 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CYTH2Q99418 400 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 CDCA3Q99618 268 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 DDX50Q9BQ39 737 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 PIGQQ9BRB3 760 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 PITPNM3Q9BZ71 974 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 GCOM2Q9BZD3 368 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 TRIM6Q9C030 488 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 SLC40A1Q9NP59 571 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.31□□□□□ -1.88
UBR1-211ENST00000569971 TXLNGQ9NUQ3 528 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 FGFR1OP2Q9NVK5 253 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 OR6C2Q9NZP2 312 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 TAAR2Q9P1P5 351 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 PAK5Q9P286 719 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 PCSK1NQ9UHG2 260 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 PIN4Q9Y237 131 aaKnown RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 NCKAP1Q9Y2A7 1128 aa3.31□□□□□ -1.88
UBR1-211ENST00000569971 MTF2Q9Y483 593 aaPredicted RBP3.31□□□□□ -1.88
UBR1-211ENST00000569971 CLUHO75153 1309 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 CCL15-CCL14A0A0B4J2E2 113 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 TMEM129A0AVI4 362 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 BCLAF3A2AJT9 711 aaKnown RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 A8MXQ7 604 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 SNURFLB1AK76 121 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 E7ESA3 106 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 GOLGA8MH3BSY2 632 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 M0R296 226 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 PDHXO00330 501 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 TRDMT1O14717 391 aaKnown RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 CHADO15335 359 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 PSMD3O43242 534 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 SPAG7O75391 227 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 GMNNO75496 209 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms