RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ZBTB26Q9HCK0 441 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 ZNF337Q9Y3M9 751 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 TSC22D4Q9Y3Q8 395 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 C16orf97H3BN30 126 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 FOXE1O00358 373 aaPredicted RBP13.36□□□□□ -0.27
USB1-214ENST00000568848 CT45A8P0DMV1 189 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 CT45A9P0DMV2 189 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 CHN1P15882 459 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 NAGAP17050 411 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 DEKP35659 375 aaKnown RBP13.36□□□□□ -0.27
USB1-214ENST00000568848 TRAF3Q13114 568 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 PON3Q15166 354 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 TSC22D1Q15714 1073 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 PRSS53Q2L4Q9 553 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 CT45A2Q5DJT8 189 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 GRTP1Q5TC63 336 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 TMEM81Q6P7N7 255 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 C20orf204Q6ZNR8 217 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 CCDC116Q8IYX3 515 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 METTL4Q8N3J2 472 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 OR2M3Q8NG83 312 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 OR4K17Q8NGC6 315 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 RAB3IL1Q8TBN0 382 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 REPS1Q96D71 796 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 ZNF681Q96N22 645 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 SERPINI1Q99574 410 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 PFDN4Q9NQP4 134 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 GRHL1Q9NZI5 618 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 WHRNQ9P202 907 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 SLC12A4Q9UP95 1085 aa13.36□□□□□ -0.27
USB1-214ENST00000568848 GPR55Q9Y2T6 319 aaPredicted RBP13.36□□□□□ -0.27
USB1-214ENST00000568848 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 SVEP1Q4LDE5 3571 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 FRG2CA6NGY1 282 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 NDUFS7O75251 213 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 SEMA3DO95025 777 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 CLDN9O95484 217 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 PDYNP01213 254 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 ATP1B1P05026 303 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 HK1P19367 917 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 DRD5P21918 477 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 CDKN1AP38936 164 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 PPICP45877 212 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 ALDH18A1P54886 795 aaKnown RBP13.35□□□□□ -0.27
USB1-214ENST00000568848 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 VEZF1Q14119 521 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 ZNF628Q5EBL2 1059 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 SH2D4BQ5SQS7 431 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 FRG2Q64ET8 278 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 TTC19Q6DKK2 380 aaPredicted RBP13.35□□□□□ -0.27
USB1-214ENST00000568848 LARP4Q71RC2 724 aaKnown RBP eCLIP13.35□□□□□ -0.27
USB1-214ENST00000568848 C7orf57Q8NEG2 295 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 TMEM171Q8WVE6 324 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 ATP6V1E2Q96A05 226 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 EXOSC8Q96B26 276 aaKnown RBP13.35□□□□□ -0.27
USB1-214ENST00000568848 PLPPR2Q96GM1 343 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 FRG2BQ96QU4 278 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 KLHDC3Q9BQ90 382 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 ACBD3Q9H3P7 528 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 FOLH1BQ9HBA9 442 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 PROCRQ9UNN8 238 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 LAMP3Q9UQV4 416 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 ACOT9Q9Y305 439 aa13.35□□□□□ -0.27
USB1-214ENST00000568848 CADP27708 2225 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 ANK2Q01484 3957 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 OR6C70A6NIJ9 312 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 ACOX3O15254 700 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 CSNK2A2P19784 350 aaPredicted RBP13.34□□□□□ -0.27
USB1-214ENST00000568848 PTNP21246 168 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 CHMP24386 653 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 CRABP2P29373 138 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 CCNG1P51959 295 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 ARFIP1P53367 373 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 DMTNQ08495 405 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 ZNF844Q08AG5 666 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 SNTA1Q13424 505 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 UAP1Q16222 522 aaPredicted RBP13.34□□□□□ -0.27
USB1-214ENST00000568848 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
USB1-214ENST00000568848 TECRLQ5HYJ1 363 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 LGSNQ5TDP6 509 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 CHMP1BQ7LBR1 199 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 LSRQ86X29 649 aaPredicted RBP13.34□□□□□ -0.27
USB1-214ENST00000568848 SLC44A2Q8IWA5 706 aaPredicted RBP13.34□□□□□ -0.27
USB1-214ENST00000568848 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
USB1-214ENST00000568848 CEP112Q8N8E3 955 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 OR4F6Q8NGB9 312 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 TMCO6Q96DC7 493 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 SLC35A4Q96G79 324 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 VPS11Q9H270 941 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 RNF122Q9H9V4 155 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 PPP4R1LQ9P1A2 415 aa13.34□□□□□ -0.27
USB1-214ENST00000568848 A0A096LPK6 155 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 OR2M5A3KFT3 312 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 GOLGA6L10A6NI86 522 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 TO15178 435 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 CDH16O75309 829 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 SOX30O94993 753 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 SOD3P08294 240 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 IL3P08700 152 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms