RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 GALNT9Q9HCQ5 603 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 SERHLQ9NQF3 203 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 C1orf109Q9NX04 203 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 MAPRE3Q9UPY8 281 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 SLC6A5Q9Y345 797 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 OR10H1Q9Y4A9 318 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 CCL27Q9Y4X3 112 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 PTGDR2Q9Y5Y4 395 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 ANKHD1Q8IWZ3 2542 aaKnown RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 DCHS2Q6V1P9 2916 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 AHRRA9YTQ3 701 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 TSPAN2O60636 221 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 IGFBP2P18065 325 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 MC3RP41968 323 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 MRPS22P82650 360 aaKnown RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 KIAA0040Q15053 153 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 PRSS53Q2L4Q9 553 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 SLC25A35Q3KQZ1 300 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 ACSF3Q4G176 576 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 NHSL2Q5HYW2 709 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 WIPI1Q5MNZ9 446 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 KANK2Q63ZY3 851 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 VASNQ6EMK4 673 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 TMEM107Q6UX40 140 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 RNF165Q6ZSG1 346 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 LARP4Q71RC2 724 aaKnown RBP eCLIP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 FAM83FQ8NEG4 500 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 DTNBP1Q96EV8 351 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 AMDHD1Q96NU7 426 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 CCT7Q99832 543 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 UGT2B28Q9BY64 529 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 PRDM14Q9GZV8 571 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 DDX18Q9NVP1 670 aaKnown RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 C19orf53Q9UNZ5 99 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 EXO1Q9UQ84 846 aaKnown RBP13.17□□□□□ -0.3
CMTM3-215ENST00000568477 CAMK2AQ9UQM7 478 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 MED12Q93074 2177 aa13.17□□□□□ -0.3
CMTM3-215ENST00000568477 HSPB2A8KAH6 182 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 PLOD2O00469 737 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 NPHS1O60500 1241 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 SPAG7O75391 227 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 CBR3O75828 277 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 CREB1P16220 341 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 BMP7P18075 431 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 TACR1P25103 407 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 ALDH3A1P30838 453 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 PNLIPRP2P54317 469 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 TLE4Q04727 773 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 HSPB2Q16082 182 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 WDR53Q7Z5U6 358 aaPredicted RBP13.16□□□□□ -0.3
CMTM3-215ENST00000568477 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
CMTM3-215ENST00000568477 LACC1Q8IV20 430 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 CLYBLQ8N0X4 340 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 OR2T11Q8NH01 316 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 ABTB1Q969K4 478 aaPredicted RBP13.16□□□□□ -0.3
CMTM3-215ENST00000568477 EGLN2Q96KS0 407 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 FCRL1Q96LA6 429 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 OR2B2Q9GZK3 357 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 GLIPR2Q9H4G4 154 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 EML4Q9HC35 981 aaKnown RBP13.16□□□□□ -0.3
CMTM3-215ENST00000568477 SLC17A7Q9P2U7 560 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 WIF1Q9Y5W5 379 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 TACC2O95359 2948 aa13.16□□□□□ -0.3
CMTM3-215ENST00000568477 SPG11Q96JI7 2443 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 HCFC1P51610 2035 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 PDPK1O15530 556 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 TYROBPO43914 113 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 EPPINO95925 133 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 ACTL6AO96019 429 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 CHRNGP07510 517 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 LINC00032P0C843 101 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 RPL38P63173 70 aaKnown RBP13.15□□□□□ -0.3
CMTM3-215ENST00000568477 PSG6Q00889 435 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 MPP2Q14168 576 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 ZNHIT3Q15649 155 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-215ENST00000568477 ARL13AQ5H913 290 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-215ENST00000568477 SH2D4BQ5SQS7 431 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 Q6ZSR9 355 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 PLCZ1Q86YW0 608 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 LIX1LQ8IVB5 337 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 DDIASQ8IXT1 998 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-215ENST00000568477 OR2L13Q8N349 312 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 WDSUB1Q8N9V3 476 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 OR14L1PQ8NHC6 308 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 TCP10LQ8TDR4 215 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 TWIST2Q8WVJ9 160 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 GFM2Q969S9 779 aaKnown RBP13.15□□□□□ -0.3
CMTM3-215ENST00000568477 EFHD2Q96C19 240 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-215ENST00000568477 ELP4Q96EB1 424 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 ZNF764Q96H86 408 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-215ENST00000568477 MECRQ9BV79 373 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 TUBB1Q9H4B7 451 aa13.15□□□□□ -0.3
CMTM3-215ENST00000568477 TMED5Q9Y3A6 229 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms