RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 SERTAD4Q9NUC0 356 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 ADPRHL2Q9NX46 363 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 GIN1Q9NXP7 522 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 SLC25A37Q9NYZ2 338 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 VPS4AQ9UN37 437 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 SH2B3Q9UQQ2 575 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 KCNE2Q9Y6J6 123 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 MYO9AB2RTY4 2548 aa4.99□□□□□ -1.61
CAPN3-217ENST00000567817 CACNA1EQ15878 2313 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 COL6A6A6NMZ7 2263 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 URB1O60287 2271 aaKnown RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 VWA8A3KMH1 1905 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 MYLKQ15746 1914 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 A0A087WWL8 130 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 C17orf113A0A1B0GUU1 675 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 MGAT4DA6NG13 374 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 LRRC3CA6NJW4 275 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ZNF99A8MXY4 864 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 CLIC1O00299 241 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 CACNB4O00305 520 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 FOXE1O00358 373 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 BCKDKO14874 412 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 SCAMP2O15127 329 aaKnown RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 PPM1DO15297 605 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 MPZL2O60487 215 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 CLPXO76031 633 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 GABARAPO95166 117 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ANGPTL1O95841 491 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 C9P02748 559 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 RPN2P04844 631 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 UGT2B4P06133 528 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 HOXB9P17482 250 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 EPORP19235 508 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 UGT1A1P22309 533 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 UGT1A4P22310 534 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 LHCGRP22888 699 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 PTPN6P29350 595 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 HLA-FP30511 346 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 KDELR2P33947 212 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 PCGF2P35227 344 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 UGT1A3P35503 534 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 UGT1A5P35504 534 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 HALP42357 657 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 UCP3P55916 312 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 C21orf59P57076 290 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 OLR1P78380 273 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 B4GALNT1Q00973 533 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 EIF2B5Q13144 721 aaKnown RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 PMS2P3Q13401 168 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 SELPLGQ14242 412 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ZNF846Q147U1 533 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 NEDD8Q15843 81 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 HIST2H2ACQ16777 129 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 BCL7AQ4VC05 210 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ZNF805Q5CZA5 627 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 SGO1Q5FBB7 561 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 XKR6Q5GH73 641 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 COLEC12Q5KU26 742 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 HENMT1Q5T8I9 393 aaKnown RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 CPTPQ5TA50 214 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ARHGAP40Q5TG30 622 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 GPR107Q5VW38 600 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 KIAA1614Q5VZ46 1190 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 KDM4DQ6B0I6 523 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 HIST2H2AA3Q6FI13 130 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 MED27Q6P2C8 311 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 TRIM40Q6P9F5 258 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 DPY19L3Q6ZPD9 716 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 DPPA4Q7L190 304 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 DET1Q7L5Y6 550 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 SYT13Q7L8C5 426 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 TSPAN33Q86UF1 283 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 THOC6Q86W42 341 aaKnown RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ZDHHC21Q8IVQ6 265 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 MSRB3Q8IXL7 192 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 SLC22A15Q8IZD6 547 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 OFCC1Q8IZS5 231 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ZNF843Q8N446 348 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 KRTCAP2Q8N6L1 136 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 C11orf65Q8NCR3 313 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 OR6K2Q8NGY2 324 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 OR56A3Q8NH54 315 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 GOT1L1Q8NHS2 421 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 WDR20Q8TBZ3 569 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 WFDC5Q8TCV5 224 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 ING5Q8WYH8 240 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 GLYATL1Q969I3 302 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 WBP2Q969T9 261 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 MUL1Q969V5 352 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 TMIGD2Q96BF3 282 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 LINC00615Q96LM1 132 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-217ENST00000567817 APOLD1Q96LR9 279 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 TSSK3Q96PN8 268 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 SMIM14Q96QK8 99 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 SLC22A12Q96S37 553 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 HBEGFQ99075 208 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 EPYCQ99645 322 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 PITX2Q99697 317 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 PCBD2Q9H0N5 130 aa4.98□□□□□ -1.61
CAPN3-217ENST00000567817 DPEP2Q9H4A9 486 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms