RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ADAM29Q9UKF5 820 aa13.96□□□□□ -0.17
PALB2-205ENST00000567003 C1orf226A1L170 272 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 C16orf97H3BN30 126 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 ZSCAN12O43309 604 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 RAD51CO43502 376 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 SCO2O43819 266 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 CRHP06850 196 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 CTAGE8P0CG41 777 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 CT45A8P0DMV1 189 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 CT45A9P0DMV2 189 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 IFT88Q13099 833 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 ACAP2Q15057 778 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 CT45A2Q5DJT8 189 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 ZNF628Q5EBL2 1059 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 RAET1LQ5VY80 246 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 OR2A2Q6IF42 318 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 PLEKHM3Q6ZWE6 761 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 LARP4Q71RC2 724 aaKnown RBP eCLIP13.95□□□□□ -0.18
PALB2-205ENST00000567003 CTAGE4Q8IX94 777 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 PLD6Q8N2A8 252 aaKnown RBP13.95□□□□□ -0.18
PALB2-205ENST00000567003 OR4N2Q8NGD1 307 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 ZNF681Q96N22 645 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 BTBD9Q96Q07 612 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 HBEGFQ99075 208 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 SLC39A3Q9BRY0 314 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 ERP44Q9BS26 406 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 DSN1Q9H410 356 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 PFDN4Q9NQP4 134 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 AHSPQ9NZD4 102 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 FLRT3Q9NZU0 649 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 PCTPQ9UKL6 214 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 ANK2Q01484 3957 aa13.95□□□□□ -0.18
PALB2-205ENST00000567003 ABCA1O95477 2261 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 A0A096LPK6 155 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.94□□□□□ -0.18
PALB2-205ENST00000567003 CRLF1O75462 422 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 KLHL2O95198 593 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 GSTA2P09210 222 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 PEPDP12955 493 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 CR1P17927 2039 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 HK1P19367 917 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 IL12BP29460 328 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 CLDN20P56880 219 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 STX5Q13190 355 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 TNK1Q13470 666 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 CAPRIN1Q14444 709 aaKnown RBP13.94□□□□□ -0.18
PALB2-205ENST00000567003 TRADDQ15628 312 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 TECRLQ5HYJ1 363 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 MEIOBQ8N635 442 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 OR9A2Q8NGT5 310 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 RNF138Q8WVD3 245 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 KCNF1Q9H3M0 494 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 ELOVL5Q9NYP7 299 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 MED11Q9P086 117 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 PPP4R1LQ9P1A2 415 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 ZNF337Q9Y3M9 751 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 TNPO3Q9Y5L0 923 aaKnown RBP13.94□□□□□ -0.18
PALB2-205ENST00000567003 SAR1BQ9Y6B6 198 aa13.94□□□□□ -0.18
PALB2-205ENST00000567003 SHISA8B8ZZ34 492 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 H3BML4 177 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 PPP6CO00743 305 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 EMC8O43402 210 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 PDYNP01213 254 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 TSPAN8P19075 237 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 STX2P32856 288 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 MAGEA4P43358 317 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 PCYT1AP49585 367 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 PLTPP55058 493 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 ATP5J2P56134 94 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 DSCR4P56555 118 aaPredicted RBP13.93□□□□□ -0.18
PALB2-205ENST00000567003 GNG11P61952 73 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 PON3Q15166 354 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 UAP1Q16222 522 aaPredicted RBP13.93□□□□□ -0.18
PALB2-205ENST00000567003 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 ZNF704Q6ZNC4 412 aaPredicted RBP13.93□□□□□ -0.18
PALB2-205ENST00000567003 CCDC116Q8IYX3 515 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 C1orf52Q8N6N3 182 aaKnown RBP13.93□□□□□ -0.18
PALB2-205ENST00000567003 FADS6Q8N9I5 356 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 OR2M3Q8NG83 312 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 OR4F6Q8NGB9 312 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 TMEM171Q8WVE6 324 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 VSTM2LQ96N03 204 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 LRRC1Q9BTT6 524 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 RTN4RQ9BZR6 473 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 VPS11Q9H270 941 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 ELOVL6Q9H5J4 265 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 RNF122Q9H9V4 155 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 FOLH1BQ9HBA9 442 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 RNF14Q9UBS8 474 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 UTS2RQ9UKP6 389 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 CLEC4AQ9UMR7 237 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 PROCRQ9UNN8 238 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
PALB2-205ENST00000567003 ZNF780BQ9Y6R6 833 aa13.93□□□□□ -0.18
PALB2-205ENST00000567003 NBEAL1Q6ZS30 2694 aa13.92□□□□□ -0.18
PALB2-205ENST00000567003 KLF4O43474 513 aa13.92□□□□□ -0.18
PALB2-205ENST00000567003 GUCY1B2O75343 617 aa13.92□□□□□ -0.18
PALB2-205ENST00000567003 ESRRBO95718 433 aa13.92□□□□□ -0.18
PALB2-205ENST00000567003 CD8BP10966 210 aa13.92□□□□□ -0.18
PALB2-205ENST00000567003 TBXA2RP21731 343 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms