RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 NT5CQ8TCD5 201 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 UTP15Q8TED0 518 aaKnown RBP8.05□□□□□ -1.12
CFDP1-206ENST00000566254 CDKL2Q92772 493 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 CCDC77Q9BR77 488 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 MYLK2Q9H1R3 596 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 DPH5Q9H2P9 285 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 SPNS1Q9H2V7 528 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 KLHL31Q9H511 634 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 COPS7BQ9H9Q2 264 aaPredicted RBP8.05□□□□□ -1.12
CFDP1-206ENST00000566254 SAYSD1Q9NPB0 183 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 AKIP1Q9NQ31 210 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 CD274Q9NZQ7 290 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 FBXW2Q9UKT8 454 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 IKZF3Q9UKT9 509 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 NDRG4Q9ULP0 352 aaKnown RBP8.05□□□□□ -1.12
CFDP1-206ENST00000566254 PCDHGB3Q9Y5G1 929 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 TEX264Q9Y6I9 313 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 RTTNQ86VV8 2226 aa8.05□□□□□ -1.12
CFDP1-206ENST00000566254 TRBV11-1A0A0K0K1C0 115 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CCDC189A1A4V9 331 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 AQP12BA6NM10 295 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CLDN4O14493 209 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 ERI3O43414 337 aaKnown RBP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CCNT2O60583 730 aaKnown RBP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 FAM20BO75063 409 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 SLC25A12O75746 678 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 MYO1DO94832 1006 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 LY6G6DO95868 133 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 SERPINA6P08185 405 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CCDC166P0CW27 439 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 C1GALT1C1LP0DN25 315 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 EGR1P18146 543 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 IVDP26440 423 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 RFC3P40938 356 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CYB561P49447 251 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 HNMTP50135 292 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 PLA2G16P53816 162 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 NUP107P57740 925 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 DEFB113Q30KQ7 82 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 C18orf21Q32NC0 220 aaPredicted RBP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 FBXO48Q5FWF7 155 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 STEAP4Q687X5 459 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 SLC25A25Q6KCM7 469 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 SBSNQ6UWP8 590 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 TMIGD1Q6UXZ0 262 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 RAPH1Q70E73 1250 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CDC20BQ86Y33 519 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 KRT73Q86Y46 540 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 GPSM1Q86YR5 675 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 TMEM156Q8N614 296 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 ATG16L2Q8NAA4 619 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 TTLQ8NG68 377 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 GOT1L1Q8NHS2 421 aaPredicted RBP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 PDLIM5Q96HC4 596 aaKnown RBP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 C20orf173Q96LM9 149 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 PCDHAC1Q9H158 963 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 RHOJQ9H4E5 214 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CNOT10Q9H9A5 744 aaKnown RBP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 CAB39LQ9H9S4 337 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 RASSF1Q9NS23 344 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 ERVK-11Q9UQG0 969 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 MRPS33Q9Y291 106 aaKnown RBP8.04□□□□□ -1.12
CFDP1-206ENST00000566254 OARD1Q9Y530 152 aa8.04□□□□□ -1.12
CFDP1-206ENST00000566254 FBN1P35555 2871 aaKnown RBP8.03□□□□□ -1.12
CFDP1-206ENST00000566254 SAGE2PA6NJ88 616 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 F5H697 171 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 SYT5O00445 386 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 TFECO14948 347 aaPredicted RBP8.03□□□□□ -1.12
CFDP1-206ENST00000566254 HS6ST1O60243 411 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 NME2P1O60361 137 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 STMN1P16949 149 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 TNNI3P19429 210 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 PPIFP30405 207 aaKnown RBP8.03□□□□□ -1.12
CFDP1-206ENST00000566254 SSTR1P30872 391 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 HPDP32754 393 aaPredicted RBP8.03□□□□□ -1.12
CFDP1-206ENST00000566254 SERPINF1P36955 418 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 RPL21P46778 160 aaKnown RBP8.03□□□□□ -1.12
CFDP1-206ENST00000566254 CLCN2P51788 898 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 NR0B1P51843 470 aaKnown RBP8.03□□□□□ -1.12
CFDP1-206ENST00000566254 TGM3Q08188 693 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 BMPR2Q13873 1038 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 SLMAPQ14BN4 828 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 HIST2H2ACQ16777 129 aaPredicted RBP8.03□□□□□ -1.12
CFDP1-206ENST00000566254 PPP1R3AQ16821 1122 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 BEAN1Q3B7T3 259 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 SPDYE7PQ495Y7 208 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 XKR6Q5GH73 641 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 HIST2H2AA3Q6FI13 130 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 TRIM40Q6P9F5 258 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 PAMR1Q6UXH9 720 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 QSOX2Q6ZRP7 698 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 MAATS1Q7Z4T9 603 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 CAMKMTQ7Z624 323 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 KRTAP1-3Q8IUG1 177 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 KLHDC8AQ8IYD2 350 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 CA13Q8N1Q1 262 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 FAM109AQ8N4B1 249 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 FAM47BQ8NA70 645 aa8.03□□□□□ -1.12
CFDP1-206ENST00000566254 ANKRD49Q8WVL7 239 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms