RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 RPL21P46778 160 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 FBXW4P57775 412 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 HERVK_113P63132 956 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ERVK-8P63133 956 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TGM3Q08188 693 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 FOXL1Q12952 345 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 DOC2AQ14183 400 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 FHL2Q14192 279 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 E2F2Q14209 437 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ZNF460Q14592 562 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 EBPQ15125 230 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 RPS6KA2Q15349 733 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TGFBIQ15582 683 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ACKR1Q16570 336 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CYP1B1Q16678 543 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 FBXO48Q5FWF7 155 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 RNASEH2BQ5TBB1 312 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 C18orf63Q68DL7 685 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 CCDC137Q6PK04 289 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TMEM64Q6YI46 380 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SLC29A4Q7RTT9 530 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ST13P4Q8IZP2 240 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TAGAPQ8N103 731 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 NKAPQ8N5F7 415 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ZNF441Q8N8Z8 693 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SRFBP1Q8NEF9 429 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 OR14K1Q8NGZ2 314 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 PPP1R14CQ8TAE6 165 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SPPL2AQ8TCT8 520 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ZNF473Q8WTR7 871 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SLC44A1Q8WWI5 657 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TANKQ92844 425 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ABTB1Q969K4 478 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 MAGOHBQ96A72 148 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ESAMQ96AP7 390 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 PERPQ96FX8 193 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TMEM41AQ96HV5 264 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 MS4A14Q96JA4 679 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ART5Q96L15 291 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 RILPQ96NA2 401 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 WFIKKN1Q96NZ8 548 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 GAL3ST4Q96RP7 486 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SECISBP2Q96T21 854 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TUBA1CQ9BQE3 449 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SFXN3Q9BWM7 321 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SORBS1Q9BX66 1292 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ERVK-6Q9BXR3 956 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 MS4A8Q9BY19 250 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ROGDIQ9GZN7 287 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 RPF2Q9H7B2 306 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 PPANQ9NQ55 473 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 DNAJC11Q9NVH1 559 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 TEX10Q9NXF1 929 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 C6orf203Q9P0P8 240 aaPredicted RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 FETUBQ9UGM5 382 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 NDRG3Q9UGV2 375 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 ERVK-19Q9WJR5 959 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 EIF3LQ9Y262 564 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 SPACA6W5XKT8 324 aa4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 FN1P02751 2386 aaKnown RBP4.77□□□□□ -1.65
AC055855.3-201ENST00000564269 FLNAP21333 2647 aaKnown RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 SVEP1Q4LDE5 3571 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 GTF3C1Q12789 2109 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 C2orf92A0A1B0GVN3 265 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 CAPN14A8MX76 684 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 SAP18O00422 153 aaKnown RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 SH3BGRLO75368 114 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 STK16O75716 305 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 TNFSF13O75888 250 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 WISP3O95389 354 aaPredicted RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 ACTL6AO96019 429 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 CYP4B1P13584 511 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 ALOX15P16050 662 aaPredicted RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 FPR1P21462 350 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 LOXP28300 417 aaPredicted RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 PTPN6P29350 595 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 GALNSP34059 522 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 CPA2P48052 419 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 MASP1P48740 699 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 PCYT1AP49585 367 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 PLIN5Q00G26 463 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 TNFRSF17Q02223 184 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 KRTAP1-1Q07627 177 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 FAM27E3Q08E93 113 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 SLAMF1Q13291 335 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 RCAN2Q14206 197 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 CAPRIN1Q14444 709 aaKnown RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 ZNF267Q14586 743 aaPredicted RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 TBCCQ15814 346 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 HIST2H2ACQ16777 129 aaPredicted RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 AP5B1Q2VPB7 878 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 LSM12Q3MHD2 195 aaKnown RBP4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 TMEM35AQ53FP2 167 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 DEPDC1Q5TB30 811 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 TMEM200BQ69YZ2 307 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 TIGD3Q6B0B8 471 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 HIST2H2AA3Q6FI13 130 aa4.76□□□□□ -1.65
AC055855.3-201ENST00000564269 OR4C11Q6IEV9 310 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms