RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 GRK5P34947 590 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 GPC1P35052 558 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 HNF1BP35680 557 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 TGFBR1P36897 503 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 MMP12P39900 470 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 KIR2DL3P43628 341 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 MTNR1BP49286 362 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 EVX1P49640 407 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 CDKN1CP49918 316 aaPredicted RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 PER3P56645 1201 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 PCBP3P57721 371 aaKnown RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 TAS2R43P59537 309 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 AP3S2P59780 193 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 DCDC1P59894 354 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 DSTNP60981 165 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 GPLD1P80108 840 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SHC2P98077 582 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SNTA1Q13424 505 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 IL18Q14116 193 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF234Q14588 700 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 GRK1Q15835 563 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 PTCHD3Q3KNS1 767 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 XKR6Q5GH73 641 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 C9orf64Q5T6V5 341 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 FAM46CQ5VWP2 391 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SLC22A10Q63ZE4 541 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF57Q68EA5 555 aaPredicted RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 BHLHB9Q6PI77 547 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 FAM151BQ6UXP7 276 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SERPINA13PQ6UXR4 307 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 TMEM92Q6UXU6 159 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 DPPA4Q7L190 304 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 TPRA1Q86W33 373 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 GRAMD2AQ8IUY3 354 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SLC22A15Q8IZD6 547 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 CHST14Q8NCH0 376 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 OR6K2Q8NGY2 324 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 OR52N1Q8NH53 320 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 WDR20Q8TBZ3 569 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 CXorf40AQ8TE69 158 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SKA2Q8WVK7 121 aaPredicted RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 HGDQ93099 445 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ERLEC1Q96DZ1 483 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 C1GALT1C1Q96EU7 318 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF354BQ96LW1 612 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 CMTM3Q96MX0 182 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 NEDD4LQ96PU5 975 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 KCNJ15Q99712 375 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 NIPSNAP1Q9BPW8 284 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SOSTQ9BQB4 213 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 RHNO1Q9BSD3 238 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 JAM3Q9BX67 310 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 MMP28Q9H239 520 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SPNS1Q9H2V7 528 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ANKRD19PQ9H560 264 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 NMNAT1Q9HAN9 279 aaPredicted RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SGK2Q9HBY8 427 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 BPIFA1Q9NP55 256 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 AMBNQ9NP70 447 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 MYNNQ9NPC7 610 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 INPP5EQ9NRR6 644 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SEMA3GQ9NS98 782 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 SLC6A13Q9NSD5 602 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 MED9Q9NWA0 146 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 LYARQ9NX58 379 aaKnown RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 MAT2BQ9NZL9 334 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 GMEB2Q9UKD1 530 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ELF5Q9UKW6 265 aaPredicted RBP8.07□□□□□ -1.12
CCDC33-209ENST00000560565 TMPRSS11EQ9UL52 423 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ICKQ9UPZ9 632 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 DYRK1BQ9Y463 629 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 ZZEF1O43149 2961 aa8.07□□□□□ -1.12
CCDC33-209ENST00000560565 PI4KAP42356 2102 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 IGLV3-16A0A075B6K0 115 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 A0A1W2PRQ8 180 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 C7orf66A4D0T2 115 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 NAP1L6A6NFF2 107 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 WASHC1A8K0Z3 465 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 IQCF5A8MTL0 148 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 KRBOX1C9JBD0 128 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 REM1O75628 298 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 HMGN1P05114 100 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 LAMP1P11279 417 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 HOXB2P14652 356 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 TIMP2P16035 220 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 TNNI3P19429 210 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 IDSP22304 550 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 TACR1P25103 407 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 AZGP1P25311 298 aaKnown RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 POU1F1P28069 291 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 STAT5AP42229 794 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 WASP42768 502 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 GDF5P43026 501 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 PDE7AQ13946 482 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 SEC23BQ15437 767 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 MINDY4Q4G0A6 757 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 SYTL3Q4VX76 610 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 CRTC2Q53ET0 693 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms