RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 SLC47A1Q96FL8 570 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 ART5Q96L15 291 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 RNF145Q96MT1 663 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 CHID1Q9BWS9 393 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 MAGIXQ9H6Y5 334 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 RUBCNLQ9H714 662 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 CALML5Q9NZT1 146 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 FOXJ2Q9P0K8 574 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 PRODH2Q9UF12 536 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 BLOC1S6Q9UL45 172 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 DTX4Q9Y2E6 619 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 PCDHGB3Q9Y5G1 929 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 FER1L5A0AVI2 2057 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 NUP210LQ5VU65 1888 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 IGHV3-20A0A0C4DH32 117 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 A0A0G2JPF8 293 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 A0A1B0GVG6 124 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 TMEM229AB2RXF0 380 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 HNRNPCL2B2RXH8 293 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 HNRNPCL3B7ZW38 293 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 SLC30A4O14863 429 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 HNRNPRO43390 633 aaKnown RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 SUV39H1O43463 412 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 BRINP1O60477 761 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 TPST1O60507 370 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 TIPRLO75663 272 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 KLF7O75840 302 aaPredicted RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 TNFSF15O95150 251 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 H6PDO95479 791 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 OPN1SWP03999 348 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 CD63P08962 238 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 HNRNPCL4P0DMR1 293 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 UQCRBP14927 111 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 RPL5P46777 297 aaKnown RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 SELENOWP63302 87 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 PSG6Q00889 435 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 ARHGAP11BQ3KRB8 267 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 SFT2D3Q587I9 215 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 TMEM205Q6UW68 189 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 FKBP9P1Q75LS8 142 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 OLIG3Q7RTU3 272 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 KRT73Q86Y46 540 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 CROCCP3Q8IVE0 287 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 LILRA2Q8N149 483 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 MORN4Q8NDC4 146 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 CHDHQ8NE62 594 aaPredicted RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 LRTOMTQ8WZ04 291 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 PIK3R3Q92569 461 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 TPD52L3Q96J77 140 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 HSH2DQ96JZ2 352 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 ZNF607Q96SK3 696 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 PKP2Q99959 881 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 DOHHQ9BU89 302 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 NUDT9Q9BW91 350 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 SLC38A1Q9H2H9 487 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 C6orf203Q9P0P8 240 aaPredicted RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 C19orf25Q9UFG5 118 aaPredicted RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 CFL2Q9Y281 166 aa10.42□□□□□ -0.74
USP3-218ENST00000560202 PTRH2Q9Y3E5 179 aaKnown RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 GPC6Q9Y625 555 aaPredicted RBP10.42□□□□□ -0.74
USP3-218ENST00000560202 GXYLT2A0PJZ3 443 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 PCNX2A6NKB5 2137 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 FCMRO60667 390 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 SERPINB7O75635 380 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 MFN2O95140 757 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 AK1P00568 194 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 MT-ND1P03886 318 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 UMODP07911 640 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 UBTFL6P0CB48 400 aaPredicted RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 ETS2P15036 469 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 HOXB6P17509 224 aaKnown RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 PSMD7P51665 324 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 POU6F2P78424 691 aaPredicted RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 HPCAP84074 193 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 CHRNEQ04844 493 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 DCST2Q5T1A1 773 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 FAM69BQ5VUD6 431 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 ERMP1Q7Z2K6 904 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 CPEB2Q7Z5Q1 589 aaKnown RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 VTCN1Q7Z7D3 282 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 MARCH9Q86YJ5 346 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 OR1N1Q8NGS0 311 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 OR2Y1Q8NGV0 311 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 SLC46A1Q96NT5 459 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 COL21A1Q96P44 957 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 SDF2Q99470 211 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 MESP1Q9BRJ9 268 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 BTBD2Q9BX70 525 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 ITPAQ9BY32 194 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 B3GNT4Q9C0J1 378 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 COPS7AQ9UBW8 275 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 RIMS3Q9UJD0 308 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 DSPPQ9NZW4 1301 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 SEC16AO15027 2179 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 SAGE2PA6NJ88 616 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 GFRA3O60609 400 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 SEMG1P04279 462 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 RAB40ALP0C0E4 278 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 CT45A8P0DMV1 189 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 CT45A9P0DMV2 189 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms